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Answer: A: cn.mops on CRAM files
3.2 years ago Günter Klambauer ▴ 540
2
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1
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640
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Answer: A: mosdepth output into cn.mops?
3.4 years ago Günter Klambauer ▴ 540
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514
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Answer: C: tumor vs control: multiple samples
3.7 years ago Günter Klambauer ▴ 540
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2.7k
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Answer: A: cn.MOPs: Error in value[[3L]](cond) :
4.1 years ago Günter Klambauer ▴ 540
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2.7k
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Answer: A: cn.MOPs: Error in value[[3L]](cond) :
4.1 years ago Günter Klambauer ▴ 540
1
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1
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821
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Answer: A: Doubt about WL in cn.mops
4.1 years ago Günter Klambauer ▴ 540
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513
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Answer: A: cn.mops: interpreting output when returnPosterior=TRUE
4.3 years ago Günter Klambauer ▴ 540
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510
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Answer: A: best way to normalize for differences in sample read depth: normalize genome vs
4.4 years ago Günter Klambauer ▴ 540
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524
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Answer: A: Error with plotting with target sequencing data
4.5 years ago Günter Klambauer ▴ 540
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0
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1.6k
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Answer: A: Cn.mops error: Error in if (sum(rds.counts) == 0) { : missing value where TR
4.5 years ago Günter Klambauer ▴ 540
0
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1
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805
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Answer: A: Error when use getSegmentReadCountsFromBAM
4.6 years ago Günter Klambauer ▴ 540
1
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0
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1.6k
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Answer: A: Cn.mops error: Error in if (sum(rds.counts) == 0) { : missing value where TR
4.6 years ago Günter Klambauer ▴ 540
0
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1
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827
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Answer: A: cn.MOPs issue with "Error in if (all(segMedianT == 0))"
4.7 years ago Günter Klambauer ▴ 540
0
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1
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688
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Answer: A: Is cn.mops can be used for detecting CNV for targeted sequencing of 8M region
4.7 years ago Günter Klambauer ▴ 540
3
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1
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924
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Answer: A: about the runs with cn.mops
5.0 years ago Günter Klambauer ▴ 540
1
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1
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1.1k
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Answer: A: cn.MOPS - reporting log normalized read counts as table
5.1 years ago Günter Klambauer ▴ 540
2
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0
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733
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Answer: A: How to combine CNVDetectionResult objects in cn.mops package
5.1 years ago Günter Klambauer ▴ 540
3
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0
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924
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Answer: A: using cn.MOPS on WES data GERMLINE-TUMOR
5.2 years ago Günter Klambauer ▴ 540
0
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0
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713
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Answer: A: getReadCountsFromBAM and paired-end reads
5.2 years ago Günter Klambauer ▴ 540
0
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1
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913
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Answer: A: Conflict in cnvr and cnvs result from cn.mops
5.2 years ago Günter Klambauer ▴ 540
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1
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824
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Answer: A: cn.mops encounter negative width problem
5.3 years ago Günter Klambauer ▴ 540
3
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775
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Answer: A: R code for cn.mops -- if a chromosome does not have CNV ?
5.3 years ago Günter Klambauer ▴ 540
3
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983
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Answer: A: R code for cn.mops
5.3 years ago Günter Klambauer ▴ 540
0
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1
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824
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Answer: A: cn.mops encounter negative width problem
5.3 years ago Günter Klambauer ▴ 540
1
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0
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639
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Answer: A: which cn.mops function should I use
5.3 years ago Günter Klambauer ▴ 540
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658
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Answer: A: cn.mops returning only "NA" as copy number
5.4 years ago Günter Klambauer ▴ 540
2
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1
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908
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Answer: A: parameter "refSeqName" in function "getReadCountsFromBAM"
5.5 years ago Günter Klambauer ▴ 540
0
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1
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858
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Answer: A: Call CNV in population with large depth variance
5.6 years ago Günter Klambauer ▴ 540
1
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1
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1.7k
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Answer: A: How to use cn.mops to detect CNVs from Targeted DNA Sequencing data?
5.6 years ago Günter Klambauer ▴ 540
0
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0
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532
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Answer: A: Input (X) data type is not numeric if read from GRanges obj
5.6 years ago Günter Klambauer ▴ 540
1
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1
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809
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Answer: A: cn.mops: NA in the output of referencecn.mops
5.7 years ago Günter Klambauer ▴ 540
0
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0
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711
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Answer: A: about cn.MOPS: paired vs unpaired
5.8 years ago Günter Klambauer ▴ 540
1
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0
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601
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Answer: A: Suggestion: type of ExpLogFoldChange (sini)
5.8 years ago Günter Klambauer ▴ 540
0
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0
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954
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Answer: A: No CNVs detected. Try changing "normalization", "priorImpact" or "thresholds".
5.9 years ago Günter Klambauer ▴ 540
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0
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954
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Answer: A: No CNVs detected. Try changing "normalization", "priorImpact" or "thresholds".
5.9 years ago Günter Klambauer ▴ 540
2
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0
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576
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Answer: A: Explain argument in fastseg function
5.9 years ago Günter Klambauer ▴ 540
2
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0
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908
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Answer: A: parameter "refSeqName" in function "getReadCountsFromBAM"
6.0 years ago Günter Klambauer ▴ 540
0
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1
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580
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Answer: A: why there are multiple calls to cnmops C function?
6.0 years ago Günter Klambauer ▴ 540
0
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0
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660
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Answer: A: problems on the CNV detection by cn.mops using multiply WGS data
6.2 years ago Günter Klambauer ▴ 540
0
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0
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963
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Answer: A: Error in referencecn.mops() for paired exome sequencing (normal/tumor)
6.5 years ago Günter Klambauer ▴ 540
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0
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963
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Answer: A: Error in referencecn.mops() for paired exome sequencing (normal/tumor)
6.5 years ago Günter Klambauer ▴ 540
1
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0
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963
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Answer: A: Error in referencecn.mops() for paired exome sequencing (normal/tumor)
6.5 years ago Günter Klambauer ▴ 540
0
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1
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1.1k
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Answer: A: Detect CNVs in target sample
6.6 years ago Günter Klambauer ▴ 540
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0
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1.3k
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Answer: A: cn.mops CNV calling for multiple samples
6.6 years ago Günter Klambauer ▴ 540
0
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0
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751
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Answer: A: cn.MOPS output file
6.6 years ago Günter Klambauer ▴ 540
2
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0
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839
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Answer: A: Save plot as png in cn.MOPS
6.6 years ago Günter Klambauer ▴ 540
2
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2
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1.2k
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Answer: A: refSeqName issue in cn.MOPS
6.6 years ago Günter Klambauer ▴ 540
0
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0
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1.7k
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Answer: A: Extracting CNV data from CNVDetectionResult
6.7 years ago Günter Klambauer ▴ 540
0
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0
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1.3k
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Answer: A: cn.mops CNV calling for multiple samples
6.7 years ago Günter Klambauer ▴ 540
0
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0
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949
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Answer: A: Complete chromosome losses and polyploidies
6.8 years ago Günter Klambauer ▴ 540
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