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Showing :
answers
2
votes
1
reply
882
views
Answer:
A: MEDIPS results differ with sample ordering
4.0 years ago
Lukas Chavez
▴ 570
1
vote
0
replies
807
views
Answer:
A: MEDIPS - Error in MEDIPS.CpGenrich
4.1 years ago
Lukas Chavez
▴ 570
1
vote
0
replies
722
views
Answer:
A: MEDIPS.CpGenrich now that RangedData is deprecated
4.2 years ago
Lukas Chavez
▴ 570
2
votes
1
reply
1.3k
views
Answer:
A: Extracting normalized counts in MEDIPS
4.4 years ago
Lukas Chavez
▴ 570
1
vote
0
replies
869
views
Answer:
A: sva correction for MEDIPS
5.2 years ago
Lukas Chavez
▴ 570
1
vote
1
reply
959
views
Answer:
A: Comparing more than 2 experimental groups with MEDIPS?
5.4 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.1k
views
Answer:
A: create.set on MEDIPS
5.4 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.2k
views
Answer:
A: CpG density in MEDIPS
5.5 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.1k
views
Answer:
A: Coupling set error in MEDIPS
5.5 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.3k
views
Answer:
A: MEDIPS - Annotation output explanation
6.0 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.9k
views
Answer:
A: MEDIP: Problem with MEDIPS.createSet
6.1 years ago
Lukas Chavez
▴ 570
2
votes
0
replies
1.2k
views
Answer:
A: RMS question in MEDIPS
6.2 years ago
Lukas Chavez
▴ 570
1
vote
0
replies
1.2k
views
Answer:
A: Window size for MEDIPS
7.0 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.1k
views
Answer:
A: How does the function MEDIPS.CpGenrich work?
7.0 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.4k
views
Answer:
A: Error raised during execution of MEDIPS package
7.1 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.1k
views
Answer:
A: MEDIPS: case study with different replicate numbers of control and case
7.3 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.1k
views
Answer:
A: Insertion size when using 'paired' in MEDIPS.createSet()
7.4 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.2k
views
Answer:
A: MEDIPS - do reads without CG's get filtered out prior to analysis?
7.5 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.1k
views
Answer:
A: How does the 'paired' argument works in MeDIPS 1.23.2
7.6 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.2k
views
Answer:
A: Gene Symbol Annotation
7.7 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.9k
views
Answer:
A: MeDIPS: warning when using "ttest" settings in MEDIPS.meth
7.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.1k
views
Answer:
A: TMM Normalization within MEDIPS ups some zero counts, is this normal?
7.7 years ago
Lukas Chavez
▴ 570
1
vote
0
replies
1.5k
views
Answer:
A: MeDIPS and use of the 'bwa' parameter
7.7 years ago
Lukas Chavez
▴ 570
1
vote
1
reply
1.4k
views
Answer:
A: Alternative methylation contexts with MEDIPS?
7.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.6k
views
Answer:
A: MEDIPS - input
7.8 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.7k
views
Answer:
A: MeQA and MEDIPS
8.0 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.6k
views
Answer:
A: MEDIPS genome Vs createROIset significance issue
8.2 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.7k
views
Answer:
A: Error in MEDIPS.calibrationCurve looking for different methylation profiles
8.2 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.3k
views
Answer:
A: How to do FDR p.adj manually on "mr.edgeR object" from MEDIPS package?
8.2 years ago
Lukas Chavez
▴ 570
2
votes
0
replies
1.2k
views
Answer:
A: How createSet from reduced "paire-ed" sequencing on MeDIPS?
8.2 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.1k
views
Answer:
A: MEDIPS stable version problem
8.3 years ago
Lukas Chavez
▴ 570
1
vote
2
replies
2.4k
views
Answer:
A: Error with MEDIPS.createSet in queryHits
updated 8.5 years ago by
Martin Morgan
25k • written 8.5 years ago by
Lukas Chavez
▴ 570
0
votes
0
replies
897
views
Answer:
A: MEDIPS test data lack of 4 files
8.8 years ago
Lukas Chavez
▴ 570
1
vote
1
reply
2.2k
views
Answer:
A: MEDIPS vs MACS: why does MEDIPS generate more conservative p-values
8.9 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.3k
views
Answer:
A: MEDIPS: Any way to get more columns/data from MEDIPS.mergeFrames?
9.0 years ago
Lukas Chavez
▴ 570
1
vote
0
replies
1.5k
views
Answer:
A: MEDIPS - RPKM
9.1 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.1k
views
Answer:
A: MEDIPS : Populating fragments from Paired End reads
9.1 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.4k
views
Answer:
A: Non-CpG Methylation in MEDIPS Package
9.1 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.7k
views
Answer:
A: MEDIPS: Output appears to be truncated
9.1 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.7k
views
Answer:
A: MEDIPS quality control
9.5 years ago
Lukas Chavez
▴ 570
1
vote
0
replies
1.5k
views
Answer:
A: MEDIPS: Export rms values as Wiggle for visualization in UCSC
9.5 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
2.5k
views
Answer:
Re: MEDIPS: how does MEDIPS define a methylated region / cluster?
9.6 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
2.5k
views
Answer:
MEDIPS: how does MEDIPS define a methylated region / cluster?
9.6 years ago
Lukas Chavez
▴ 570
0
votes
2
replies
2.5k
views
Answer:
A: MEDIPS: how does MEDIPS define a methylated region / cluster?
9.6 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
2.1k
views
Answer:
A: How does MEDIPS handle multiple mapping of a read
9.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.3k
views
Answer:
A: non-CpG methylated regions and strand information in MEDIPS output
9.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.6k
views
Answer:
A: mr.edgeR tests in MEDIPS package
9.9 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
2.0k
views
Answer:
A: It works! RE: So close, but still error: RE: Rsamtools filtering bam file: RE: M
10.0 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.7k
views
Answer:
A: So close, but still error: RE: Rsamtools filtering bam file: RE: MEDIPS.createSe
10.1 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.2k
views
Answer:
A: MEDIPS.createSet error
10.1 years ago
Lukas Chavez
▴ 570
64 results • Page
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