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2
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591
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annotate peaks using a custom genome
ChIPSeq annotate ChIPpeakAnno
updated 12 months ago by ▴ 70 • written 12 months ago by ▴ 140
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0
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591
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Comment: Comment: annotate peaks using a custom genome
12 months ago C T ▴ 140
0
votes
2
replies
636
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DiffBind custom normalization factor
diffbind
updated 3.5 years ago by ★ 5.1k • written 4.1 years ago by ▴ 140
4
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5
replies
1.9k
views
emptyDrops identified less non-empty cells with lower total UMI counts?
DropletUtils scRNA-seq emptyDrops simplesinglecell cell calling
updated 3.5 years ago by ★ 28k • written 4.7 years ago by ▴ 140
1
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0
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1.8k
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Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
3.6 years ago C T ▴ 140
7
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9
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1.8k
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counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
chippeakanno
updated 3.6 years ago by ★ 4.3k • written 3.7 years ago by ▴ 140
1
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0
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1.8k
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Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
3.6 years ago C T ▴ 140
1
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1
reply
1.8k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
3.6 years ago C T ▴ 140
1
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1
reply
1.8k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
3.7 years ago C T ▴ 140
0
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0
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792
views
Comment: C: how to suppress makeVennDiagram plot
3.7 years ago C T ▴ 140
2
votes
2
replies
792
views
how to suppress makeVennDiagram plot
ChIPpeakAnno
3.7 years ago C T ▴ 140
1
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3
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1.1k
views
csaw differential binding visualization
csaw
updated 4.1 years ago by ★ 28k • written 4.1 years ago by ▴ 140
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0
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2.2k
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Comment: C: DiffBind for ATAC-seq -- bFullLibrarySize parameter
4.1 years ago C T ▴ 140
0
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1
reply
683
views
Comment: C: how to draw multiple heatmap from GeneOverlap
4.2 years ago C T ▴ 140
0
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3
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683
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how to draw multiple heatmap from GeneOverlap
GeneOverlap multiple figures heatmap
updated 4.2 years ago by 65k • written 4.2 years ago by ▴ 140
0
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0
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2.1k
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Comment: C: Error in creating BSGenome package
4.5 years ago C T ▴ 140
0
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1
reply
1.9k
views
Comment: C: emptyDrops identified less non-empty cells with lower total UMI counts?
4.7 years ago C T ▴ 140
0
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1
reply
1.7k
views
Advice on correcting for batch effect using DESeq2
deseq2
updated 5.0 years ago by 41k • written 5.0 years ago by ▴ 140
0
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0
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3.0k
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Comment: C: Dispersion fit and p-value distributions
5.5 years ago C T ▴ 140
0
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0
replies
3.0k
views
Comment: C: Dispersion fit and p-value distributions
5.5 years ago C T ▴ 140
7
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9
replies
3.0k
views
Dispersion fit and p-value distributions
deseq2 rnaseq fdrtool
updated 5.5 years ago by ★ 7.9k • written 5.5 years ago by ▴ 140
0
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2
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3.0k
views
Comment: C: Dispersion fit and p-value distributions
5.5 years ago C T ▴ 140
0
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1
reply
3.1k
views
Comment: C: DESeq2 PCA plot on fitted values
5.8 years ago C T ▴ 140
0
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0
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3.1k
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Comment: C: DESeq2 PCA plot on fitted values
5.8 years ago C T ▴ 140
6
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5
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2.4k
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reads alignment statistics
rsubread bioconductor
updated 6.6 years ago by 16k • written 6.6 years ago by ▴ 140
1
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0
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2.4k
views
Comment: C: reads alignment statistics
6.6 years ago C T ▴ 140
0
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1
reply
2.4k
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Comment: C: reads alignment statistics
6.6 years ago C T ▴ 140
0
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1
reply
2.0k
views
PCR bottleneck coefficient (PBC)
chipqc
updated 6.8 years ago by ★ 5.1k • written 6.8 years ago by ▴ 140
0
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1
reply
2.9k
views
Comment: C: Technical details of DiffBind correlation analysis
6.8 years ago C T ▴ 140
0
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0
replies
1.3k
views
Comment: C: ChIPQC plotCoverageHist() and plotCC() not showing inputs
6.8 years ago C T ▴ 140
0
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0
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1.0k
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Comment: C: ChIPQC plots for input samples
6.8 years ago C T ▴ 140
0
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2
replies
1.0k
views
ChIPQC plots for input samples
chipqc
updated 6.8 years ago by ▴ 420 • written 6.8 years ago by ▴ 140
0
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3
replies
1.2k
views
ChIPQC reading more samples that it should
chipqc
6.8 years ago C T ▴ 140
0
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1
reply
1.2k
views
Answer: A: ChIPQC reading more samples that it should
6.8 years ago C T ▴ 140
0
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0
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2.4k
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Comment: C: ChIPseeker annotatePeak definition
7.6 years ago C T ▴ 140
0
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2
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2.4k
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ChIPseeker annotatePeak definition
chipseeker
updated 7.6 years ago by ★ 1.2k • written 7.6 years ago by ▴ 140
0
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0
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3.3k
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Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
7.9 years ago C T ▴ 140
0
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1
reply
3.3k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
7.9 years ago C T ▴ 140
0
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0
replies
3.3k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
7.9 years ago C T ▴ 140
0
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0
replies
3.3k
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Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
7.9 years ago C T ▴ 140
5
votes
15
replies
3.3k
views
nearest genes using TxDb.Hsapiens.UCSC.hg19
txdb.hsapiens.ucsc.hg19.knowngene ChIPpeakAnno
updated 7.9 years ago by ★ 4.3k • written 7.9 years ago by ▴ 140
0
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1
reply
3.3k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
7.9 years ago C T ▴ 140
0
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0
replies
3.3k
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Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
7.9 years ago C T ▴ 140
0
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1
reply
3.3k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
7.9 years ago C T ▴ 140
0
votes
2
replies
3.3k
views
Answer: A: nearest genes using TxDb.Hsapiens.UCSC.hg19
7.9 years ago C T ▴ 140
0
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0
replies
1.4k
views
get precursor mirna from mature mirna
bioconductor mirna mir mirbase.db
8.3 years ago C T ▴ 140
0
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0
replies
2.4k
views
Comment: C: mzR crashes R
11.1 years ago C T ▴ 140
0
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1
reply
2.4k
views
Comment: C: mzR crashes R
11.1 years ago C T ▴ 140
0
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1
reply
2.4k
views
Comment: C: mzR crashes R
11.1 years ago C T ▴ 140
0
votes
0
replies
1.5k
views
Comment: C: installing Rdisop
11.1 years ago C T ▴ 140
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