User: Kevin Ushey

gravatar for Kevin Ushey
Kevin Ushey10
Reputation:
10
Status:
New User
Location:
United States
Last seen:
1 year ago
Joined:
4 years, 6 months ago
Email:
k*********@gmail.com

Posts by Kevin Ushey

<prev • 6 results • page 1 of 1 • next >
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Comment: C: BiocInstaller fails to load with older R within a 'suppressMessages()' context
... Hi Martin, Thanks for the response -- it looks like the current development version of BiocInstaller should indeed resolve this particular issue. For reference, RStudio attempts to force the use of https on startup by taking over the 'download.file.method' and 'download.file.extra' options. The lo ...
written 12 months ago by Kevin Ushey10
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Comment: C: BiocInstaller fails to load with older R within a 'suppressMessages()' context
... I believe https://support.bioconductor.org/p/84173/ is related (although a reproducible example was not discovered there). ...
written 12 months ago by Kevin Ushey10
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BiocInstaller fails to load with older R within a 'suppressMessages()' context
... To reproduce, try running the following code on a version with R without libcurl support (e.g. the Snow Leopard build of R 3.2.1): > suppressMessages(library(BiocInstaller)) Error : .onLoad failed in loadNamespace() for 'BiocInstaller', details: call: url(paste0(.protocol(), "//bioconductor.o ...
biocinstaller written 12 months ago by Kevin Ushey10 • updated 12 months ago by Martin Morgan ♦♦ 20k
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Answer: A: Request: Annotate DESCRIPTION of 'extra' packages with 'biocViews' or other iden
... Thanks Dan -- that will definitely suffice for us. Much appreciated! ...
written 2.5 years ago by Kevin Ushey10
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Request: Annotate DESCRIPTION of 'extra' packages with 'biocViews' or other identifying tag
... Bioconductor hosts a couple of 'extra' packages, with the current set of 'release' packages annotated here:     http://bioconductor.org/packages/release/extra/ It is rather nice that Bioconductor mirrors a subset of packages from external repositories. However, it appears to me that there is no co ...
bioconductor extra-packages written 2.5 years ago by Kevin Ushey10
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Problems with SVGAnnotation package
... Hi, I'm having trouble using the SVGAnnotation package with R 3.0.0. In particular, I'm unable to run any of the examples available at http://www.omegahat.org/SVGAnnotation/tests/examples.html ; these all worked AFAIK with R prior to 3.0.0. Here's some example output from trying to run the first ex ...
written 4.6 years ago by Kevin Ushey10 • updated 4.6 years ago by Dan Tenenbaum ♦♦ 8.2k

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