User: Gad Abraham

gravatar for Gad Abraham
Gad Abraham20
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4 years, 6 months ago
Joined:
4 years, 6 months ago
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g**********@gmail.com

Posts by Gad Abraham

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Comment: C: VariantAnnotation and distance to genes
... Thanks James, Valerie, and Steve. I was tripped up by the distance() function in BioC 2.11, which requires both arguments to have same length, but upgrading to 2.12 solved that. Cheers, Gad On 14 May 2013 02:23, Steve Lianoglou wrote: > Hi, > > On Mon, May 13, 2013 at 8:48 AM, James ...
written 4.5 years ago by Gad Abraham20
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VariantAnnotation and distance to genes
... Hi, I'm using VariantAnnotation, which is a very nice package, to annotate some SNPs, based on http://adairama.wordpress.com/2013/02/15/functionally-annotate-snps- and-indels-in-bioconductor . For SNPs annotated as intergenic and therefore falling between two genes (PRECEDEID and FOLLOWID), is the ...
variantannotation written 4.5 years ago by Gad Abraham20 • updated 4.5 years ago by James W. MacDonald45k

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