User: Michael Steeves

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6 years, 2 months ago
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Posts by Michael Steeves

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Comment: C: 'version' is missing error when running makeTxDbPackageFromUCSC
... On 8/27/13 6:31 PM, Dan Tenenbaum wrote: > This means you have to supply a 'version' argument. See > ?makeTxDbPackageFromUCSC Dan: This does fix the issue on OS X, however I'm still getting an error running the example from the help page on RHEL: > txdb <- makeTxDbPackageFromUCSC(ver ...
written 6.2 years ago by Michael Steeves40
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'version' is missing error when running makeTxDbPackageFromUCSC
... On OS X (10.8.4) with R 3.0.1, I'm getting an error when running the following three lines of code: library(GenomicRanges) library(GenomicFeatures) txdb <- makeTxDbPackageFromUCSC(genome = 'mm9', tablename = 'refGene') Download the refGene table ... OK Download the refLink table ... OK Extract ...
transcriptdb iranges written 6.2 years ago by Michael Steeves40 • updated 6.2 years ago by Dan Tenenbaum8.2k
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Answer: A: Amazon EC2 MPI Cluster
... On 6/10/13 7:58 AM, Jonas Gylden wrote: > Hi all, > > I am trying to start an MPI Cluster in Amazon EC2. I am using the link "Start MPI Cluster" in the guide Bioconductor - Cloud AMI. I try to launch the cluster with the instance type "cc2.8xlarge" but unfortunately I run into an error. It ...
written 6.4 years ago by Michael Steeves40
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Problem when loading simpleaffy package
... When I try to load up the simpleaffy package, at the end it generates an error message: Loading required package: Biobase Welcome to Bioconductor Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'c ...
simpleaffy written 6.5 years ago by Michael Steeves40 • updated 6.5 years ago by Martin Morgan ♦♦ 24k

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