User: fabian

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fabian10
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Posts by fabian

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Comment: C: DESeq2: Tests of log2 differences
... Those replies come almost as fast as if I would call you. Thank you very much for your assistance. ...
written 5 months ago by fabian10
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Comment: A: DESeq2: Tests of log2 differences
... Dear Michael, thank you very much your helpful and prompt help. The suggested approach seems to fit indeed. I see only one potential problem.  Since I do have nascent RNA and polyA signal from the same biological replica, so I do have paired data. If I now go along your suggested line, I somehow pr ...
written 5 months ago by fabian10
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DESeq2: Tests of log2 differences
... Dear all I have sequencing data reflecting the amount of nascent mRNA and I have from the same biological samples data reflecting the polyA fraction. both for two conditions (treated and unteated). I plan to do differential gene expression analysis on the nascent RNA-seq (to get an idea of differen ...
transcription deseq2 rna-seq dgea written 6 months ago by fabian10
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Answer: A: pathview -- ID Problem?
... Hello It took me a while but I figured that. Anyway, thank you very much for coming back to me for this correction. Best Fabian On 01-11-2013 01:03, Luo Weijun wrote: > There was a typo in my original response, id.type should be > gene.idtype. The correct one is: > ..., for you data, you ...
written 4.1 years ago by fabian10

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