User: Daniel Bottomly

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New User
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United States
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1 year, 5 months ago
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b*******@ohsu.edu

Posts by Daniel Bottomly

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Comment: C: Installation of CountClust fails
... Yes, that does work for me.  However, it is unfortunate that the main Bioconductor version does not. ...
written 2.6 years ago by Daniel Bottomly20
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Installation of CountClust fails
... Hi: I'm having an issue loading the release version of CountClust. See below for a reproducible example with error in yellow. I assume this is due to changes in the 'cowplot' CRAN package? Thanks, Dan > source("http://bioconductor.org/biocLite.R") Bioconductor version 3.4 (BiocInstaller 1.2 ...
package installation countclust written 2.6 years ago by Daniel Bottomly20
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Answer: A: Summarisation in oligo package after exclusion of probes containing SNPs
... Hi Jimmy: 1.) We do variations on this procedure quite frequently in the field of mouse genetics and do find it to be useful in practice. The most common way that I have seen is to remove the probes ahead of time prior to background correction. That being said, it would be interesting to compare t ...
written 6.0 years ago by Daniel Bottomly20

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