User: Tim Triche, Jr.

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Posts by Tim Triche, Jr.

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AllelicImbalance with VCFs?
... Hi all, I'm looking to verify some RNAseq results using (in some cases phased) SNP calls from the CEU trio and from primary samples in-house (case and matched control). AllelicImbalance looks like a terrific library for this, however my BCFs can't be read by Rsamtools::scanBcf. (I get an error "E ...
rnaseq cancer trio allelicimbalance written 5.6 years ago by Tim Triche, Jr.10 • updated 5.6 years ago by Jesper Robert Gadin20

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