User: Tommaso Raffaello

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5 years, 4 months ago
Joined:
5 years, 7 months ago
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t****************@helsinki.fi

Posts by Tommaso Raffaello

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EasyqPCR package - extracting Standard error values
... Dear Bioconductor users, I´m using the package EasyqpcR to analyze my qPCR data. Is there any way to extract the standard error calculation values which are given by the nrmData function and include them is a data frame for example? Also, if I include the slope calculation in a object ("efficienc ...
qpcr easyqpcr written 5.4 years ago by Tommaso Raffaello60
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Comment: C: Problem "Error: is.character(filenames) is not TRUE" in read.xysfiles (Oligo pac
... Hi, thanks I solved the problem. The .xys file header was missing. I copied it from the .pair files. Thanks! Tommaso On 15/04/2014 17:33, James W. MacDonald wrote: > Hi Tommaso, > > On 4/15/2014 7:03 AM, Tommaso Raffaello wrote: >> Hi, >> >> Thanks! However, I still ha ...
written 5.6 years ago by Tommaso Raffaello60
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Comment: C: Problem "Error: is.character(filenames) is not TRUE" in read.xysfiles (Oligo pac
... Hi, Thanks! However, I still have some problems. Please see below what I have done. Actually I have downloaded and installed the "maqcExpression4plex-package" to check the xys files examples and mine should be ok. What could the problem be? Thank you so much for your help! Tommaso >pine_sam ...
written 5.6 years ago by Tommaso Raffaello60
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Problem "Error: is.character(filenames) is not TRUE" in read.xysfiles (Oligo package)
... Hi, I have problem in reading my .xys files using the function read.xysfiles in Oligo package (I have created my .xys based on my .pair files following instruction I found on [BioC]). Here is what I have done: >basename(xys) [1] "Drained_control_1.xys" "Drained_control_2.xys" "Draine ...
annotation oligo pdinfobuilder written 5.6 years ago by Tommaso Raffaello60 • updated 5.6 years ago by James W. MacDonald51k
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Comment: C: pdInfoBuilder - problem installing the annotation package
... Hi, thanks for your help! Apparently I managed to install and load the package. There is still a warning message but probably it´s fine? Here is the output: >install.packages('C:/HY-data/TORAFFAE/R_projects/Pine Microarray/pd.110224.pinus.fa.exp.modified', repo=NULL, type = 'source') Warning ...
written 5.6 years ago by Tommaso Raffaello60
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pdInfoBuilder - problem installing the annotation package
... Hi, in the pdInfoBuilder manual it´s written "After the package is created, the user must install it and not just copy it to the library tree." I have created the annotation file with the pdInfoBuilder package, however I can´t install it. The error message is: Warning in install.packages : pa ...
annotation pdinfobuilder written 5.6 years ago by Tommaso Raffaello60 • updated 5.6 years ago by Benilton Carvalho4.3k

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Popular Question 5.4 years ago, created a question with more than 1,000 views. For Problem "Error: is.character(filenames) is not TRUE" in read.xysfiles (Oligo package)

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