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Comment: C: Recount data for unannotated genes
5.9 years ago Leonardo Collado Torres ★ 1.1k
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1.2k
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Answer: A: Number of reads from recount are greater than target library size (40 million)
5.9 years ago Leonardo Collado Torres ★ 1.1k
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0
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1.7k
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Answer: A: Recount data for unannotated genes
5.9 years ago Leonardo Collado Torres ★ 1.1k
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2
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1.8k
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Error with untar2 that blocks the installation of GO.db on Windows (R 3.5, Bioc 3.8) for using clusterProfiler
go.db clusterprofiler
updated 6.3 years ago by 25k • written 6.3 years ago by ★ 1.1k
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1.8k
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Comment: C: Error with untar2 that blocks the installation of GO.db on Windows (R 3.5, Bioc
6.3 years ago Leonardo Collado Torres ★ 1.1k
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1.8k
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Comment: C: What assays are distributed with Recount TX data
6.3 years ago Leonardo Collado Torres ★ 1.1k
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3.8k
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Answer: A: Is GTEx age and sex data available via the recount package?
6.4 years ago Leonardo Collado Torres ★ 1.1k
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0
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1.3k
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Answer: A: What does scaling RNASeq data using the area under coverage information (AUC) me
6.5 years ago Leonardo Collado Torres ★ 1.1k
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0
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1.7k
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Comment: C: DESeq2 error: "vector: cannot make a vector of mode 'S4'"
6.6 years ago Leonardo Collado Torres ★ 1.1k
1
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0
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2.5k
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Comment: C: Latin American BioC Developers Workshop 2018
6.9 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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1.4k
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Comment: C: According to Recount2 metadata and Recount2 website, SRP000941 has 345 samples,
7.0 years ago Leonardo Collado Torres ★ 1.1k
0
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1
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1.4k
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Answer: A: According to Recount2 metadata and Recount2 website, SRP000941 has 345 samples,
7.0 years ago Leonardo Collado Torres ★ 1.1k
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0
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1.3k
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Answer: A: Recount2 TCGA metadata missing sample, run and experiment columns
7.1 years ago Leonardo Collado Torres ★ 1.1k
1
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0
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2.1k
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Answer: A: Hm... segfault when using qvalue 1.39.1, has anyone else encountered this?
7.1 years ago Leonardo Collado Torres ★ 1.1k
1
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5
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2.1k
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Hm... segfault when using qvalue 1.39.1, has anyone else encountered this?
qvalue segfault
10.4 years ago • updated 7.1 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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2.1k
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Comment: C: Hm... segfault when using qvalue 1.39.1, has anyone else encountered this?
7.1 years ago Leonardo Collado Torres ★ 1.1k
1
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0
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2.1k
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Comment: C: derfinder: how to merge regions and counts from individual chromosomes
7.3 years ago Leonardo Collado Torres ★ 1.1k
2
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1
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2.1k
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Answer: A: derfinder: how to merge regions and counts from individual chromosomes
7.3 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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1.1k
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Comment: C: Time-course group difference analysis with repeated individuals using limma-voom
7.3 years ago Leonardo Collado Torres ★ 1.1k
1
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3
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1.1k
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Time-course group difference analysis with repeated individuals using limma-voom
limma
updated 7.3 years ago by ★ 28k • written 7.3 years ago by ★ 1.1k
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Comment: C: Time-course group difference analysis with repeated individuals using limma-voom
7.3 years ago Leonardo Collado Torres ★ 1.1k
2
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0
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1.6k
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Answer: A: derfinder mean Expressed Region cutoff
7.3 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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1.4k
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Answer: A: Getting pheno tables from recount datasets without any NA values in characterist
7.3 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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3.4k
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Comment: C: NA values of count matrix in class DESeqDataSet
7.5 years ago Leonardo Collado Torres ★ 1.1k
0
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1
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4.6k
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Comment: C: NA values of count matrix in class DESeqDataSet
7.5 years ago Leonardo Collado Torres ★ 1.1k
1
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0
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1.7k
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Issue with bumphunter and TxDb.Hsapiens.UCSC.hg38.knownGene that could be due to S4Vectors or an installation problem
s4vectors bumphunter txdb.hsapiens.ucsc.hg38.knowngene
7.5 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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2.4k
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Answer: A: Recount TCGA data
7.5 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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1.6k
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Comment: C: How to preserve the strand of coverage in derfinder::regionMatrix() ?
7.5 years ago Leonardo Collado Torres ★ 1.1k
0
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2
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1.6k
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Answer: A: How to preserve the strand of coverage in derfinder::regionMatrix() ?
7.5 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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2.6k
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Comment: C: Matching columns to sample names
7.5 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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2.6k
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Comment: C: Matching columns to sample names
7.5 years ago Leonardo Collado Torres ★ 1.1k
0
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2
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2.6k
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Answer: A: Matching columns to sample names
7.6 years ago Leonardo Collado Torres ★ 1.1k
0
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1
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3.0k
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Comment: C: IRanges error from derfinder analyzeChr with custom TxDb?
7.6 years ago Leonardo Collado Torres ★ 1.1k
2
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1
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3.0k
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Answer: A: IRanges error from derfinder analyzeChr with custom TxDb?
7.6 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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3.0k
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Comment: C: IRanges error from derfinder analyzeChr with custom TxDb?
7.6 years ago Leonardo Collado Torres ★ 1.1k
1
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1
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3.0k
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Comment: C: IRanges error from derfinder analyzeChr with custom TxDb?
7.6 years ago Leonardo Collado Torres ★ 1.1k
0
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2
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3.0k
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Comment: C: IRanges error from derfinder analyzeChr with custom TxDb?
7.6 years ago Leonardo Collado Torres ★ 1.1k
1
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0
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1.4k
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Answer: A: Read normalization in derfinder
7.6 years ago Leonardo Collado Torres ★ 1.1k
2
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0
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1.2k
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Answer: A: Derinder options (species, annotations style)
7.6 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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2.0k
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Comment: C: Issue with pandoc-citeproc when rendering the f1000 article Rmd file from BiocWo
7.8 years ago Leonardo Collado Torres ★ 1.1k
3
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2
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2.0k
views
Issue with pandoc-citeproc when rendering the f1000 article Rmd file from BiocWorkFlowTools
BiocWorkflowTools rmarkdown
updated 7.8 years ago by ▴ 750 • written 7.8 years ago by ★ 1.1k
2
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1
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1.7k
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Answer: A: Number of IRanges elements in TCGA HiSeqV2 dataset
7.8 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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2.3k
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Comment: C: recount counts in the example experiment
7.8 years ago Leonardo Collado Torres ★ 1.1k
0
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1
reply
2.3k
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Comment: C: recount counts in the example experiment
7.8 years ago Leonardo Collado Torres ★ 1.1k
0
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1
reply
2.3k
views
Comment: C: recount counts in the example experiment
7.8 years ago Leonardo Collado Torres ★ 1.1k
0
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1
reply
2.3k
views
Comment: C: recount counts in the example experiment
7.8 years ago Leonardo Collado Torres ★ 1.1k
0
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2
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2.3k
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Answer: A: recount counts in the example experiment
7.8 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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1.5k
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Comment: C: derfinder fullCoverage() changes chromosome style and then regionMatrix() compla
7.9 years ago Leonardo Collado Torres ★ 1.1k
0
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2
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2.6k
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Answer: A: regionMatrix for derfinder crashes with seqnames issue on non-human data
7.9 years ago Leonardo Collado Torres ★ 1.1k
0
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0
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2.6k
views
Comment: C: regionMatrix for derfinder crashes with seqnames issue on non-human data
7.9 years ago Leonardo Collado Torres ★ 1.1k
278 results • Page 3 of 6
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