User: rtraborn
rtraborn • 0
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Posts by rtraborn
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C: Package update not recorded
... I see that my package been built now- thanks so much! ...
written 14 days ago by
rtraborn • 0
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... Hello:
On Monday evening October 1st I pushed an update to the RELEASE_3_9 branch of my package TSRchitect.
However, the update hasn't been recorded on the Bioconductor build site https://www.bioconductor.org/checkResults/3.9/bioc-LATEST/TSRchitect (though strangely enough this link is now dead). ...
written 15 days ago by
rtraborn • 0
• updated
15 days ago by
Martin Morgan ♦♦ 23k
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C: Access to Bioc github repository
... Hi Martin:
Thank you for your message. I agree with you that this does not fit the topic of this site; the issue was addressed minutes ago via bioc-devel email support. I apologize for my oversight.
Best regards,
Taylor
...
written 2.0 years ago by
rtraborn • 0
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... Hello:
On Monday I submitted my updated credentials (including my svn username) to the form here: https://docs.google.com/forms/d/e/1FAIpQLSdlTbNjsQJDp0BA480vo4tNufs0ziNyNmexegNZgNieIovbAA/viewform, but when I try to sync it I get another 'permission denied (publickey)' message.
Was there a probl ...
written 2.0 years ago by
rtraborn • 0
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... Hi Nitesh:
On Monday I submitted my updated credentials (including my svn username) to the form here: https://docs.google.com/forms/d/e/1FAIpQLSdlTbNjsQJDp0BA480vo4tNufs0ziNyNmexegNZgNieIovbAA/viewform, but when I try to sync this morning I get another 'permission denied (publickey)' message.
Was ...
written 2.0 years ago by
rtraborn • 0
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... Hi Nitesh;
Thank you for the reply. My package was accepted relatively close to the transition from svn to git, so I wasn't sure I had a svn ID. As it happens, I do, and I provided this information in the form a few moments ago.
Thanks again for your help,
Taylor
...
written 2.0 years ago by
rtraborn • 0
1
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... Hello:
We want to push the latest release of our package, TSRchitect (https://github.com/BrendelGroup/TSRchitect) to Bioconductor.
On Wednesday I followed the instructions and added my github username and public key here: https://docs.google.com/forms/d/e/1FAIpQLSdlTbNjsQJDp0BA480vo4tNufs0ziNyNmex ...
written 2.1 years ago by
rtraborn • 0
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Comment:
C: Upgrade to 3.1 error
... Hi Martin:
Thank you for your response, which helped me find the problem. This was an issue of having another BiocInstaller/ lurking in a second R library. Once I deleted the offending second package the above instructions worked like a charm, and now I'm running Bioconductor v 3.2.
> source(" ...
written 4.4 years ago by
rtraborn • 0
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Comment:
C: Upgrade to 3.1 error
... I did remove BiocInstaller() just prior to the entering the commands I listed.
...
written 4.4 years ago by
rtraborn • 0
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Comment:
C: Upgrade to 3.1 error
... I'd like to report the same problem as Liobin- I upgraded to R 3.2 yet when I try to upgrade I get the following:
> source("http://bioconductor.org/biocLite.R")
> biocLite("BiocUpgrade")
Error: Bioconductor version 3.0 cannot be upgraded with R version 3.1.0
Here's some more info:
> ...
written 4.4 years ago by
rtraborn • 0
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