User: Jan Oosting
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Posts by Jan Oosting
... The segmentate function in the beadarraySNP package can use LAIR (a B-allele derivative) to improve segmentation. It actually segmentates the copy number signal first, and splits segments if subsegmenst are found with differing B-alleles ...
... I have updated the quantsmooth package for the new version of Bioconductor to address this issue. In the new version you can either use the annotation for the last few human genome versions or supply the data yourself. ...
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