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Comment: C: ChIPQC plotCoverageHist() not showing inputs
7.2 years ago Thomas Carroll ▴ 420
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2
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1.4k
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Comment: C: ChIPQCreport yields a cryptic error if "Replicate" data is not specified
7.6 years ago Thomas Carroll ▴ 420
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1.4k
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Answer: A: ChIPQC on samples without peaks and wrong total reads
7.6 years ago Thomas Carroll ▴ 420
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0
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1.4k
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Comment: C: ChIPQCreport yields a cryptic error if "Replicate" data is not specified
7.6 years ago Thomas Carroll ▴ 420
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2.0k
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Comment: C: ChIPQC GRCh38 usage yields "Unsupported annotation:hg38"
7.6 years ago Thomas Carroll ▴ 420
1
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1
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2.0k
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Comment: C: ChIPQC GRCh38 usage yields "Unsupported annotation:hg38"
7.6 years ago Thomas Carroll ▴ 420
2
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2.0k
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Answer: A: ChIPQC GRCh38 usage yields "Unsupported annotation:hg38"
7.6 years ago Thomas Carroll ▴ 420
1
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1
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1.4k
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Answer: A: ChIPQC on samples without peaks and wrong total reads
7.6 years ago Thomas Carroll ▴ 420
1
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1
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14k
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Answer: A: Error: Faceting variables must have at least one value when plotting with ChIPQC
7.6 years ago Thomas Carroll ▴ 420
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1
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2.3k
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Comment: C: ChIPQC for a single sample (disabling facets)
7.6 years ago Thomas Carroll ▴ 420
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1
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2.3k
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Comment: C: ChIPQC for a single sample (disabling facets)
7.6 years ago Thomas Carroll ▴ 420
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1.3k
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Answer: A: Problems with double read counts on ChIPQC
7.6 years ago Thomas Carroll ▴ 420
0
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1
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14k
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Answer: A: Error: Faceting variables must have at least one value when plotting with ChIPQC
7.7 years ago Thomas Carroll ▴ 420
2
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1
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2.0k
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Comment: C: ChIPQC error: "if (nrow(pv$binding) > 0) { : argument is of length zero"
7.7 years ago Thomas Carroll ▴ 420
1
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2
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2.3k
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Answer: A: ChIPQC for a single sample (disabling facets)
7.8 years ago Thomas Carroll ▴ 420
0
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1
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8.2k
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Answer: A: DESeqDataSetFromMatrix giving error: "argument must be coercible to non-negative
7.8 years ago Thomas Carroll ▴ 420
0
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0
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1.5k
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Comment: C: ChIPQC error: Error in generating sample data
7.9 years ago Thomas Carroll ▴ 420
2
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1.1k
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Answer: A: shiftApply verbosity (in ChIPQC)
8.0 years ago Thomas Carroll ▴ 420
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0
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857
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Answer: A: ChipQC report tables
8.0 years ago Thomas Carroll ▴ 420
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0
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1.3k
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Answer: A: ChipQCSample error Error in `colnames<-`(`*tmp*`, value = c("A", "B", "C")) :
8.0 years ago Thomas Carroll ▴ 420
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0
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2.2k
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Comment: C: ChIPQC and/or Diffbind - retrieving normalized read counts for peaks from single
8.2 years ago Thomas Carroll ▴ 420
0
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2
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2.2k
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Comment: C: ChIPQC and/or Diffbind - retrieving normalized read counts for peaks from single
8.2 years ago Thomas Carroll ▴ 420
1
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0
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2.2k
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Answer: A: ChIPQC and/or Diffbind - retrieving normalized read counts for peaks from single
8.2 years ago Thomas Carroll ▴ 420
3
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1
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1.5k
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Rsubread error when aligning (- FATAL: INFLATE-ERROR=-5)
software error rsubread alignment
updated 8.4 years ago by ★ 3.6k • written 8.4 years ago by ▴ 420
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1.7k
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Comment: C: Error in ChIPQC
8.5 years ago Thomas Carroll ▴ 420
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0
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1.7k
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Comment: C: Error in ChIPQC
8.5 years ago Thomas Carroll ▴ 420
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0
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2.3k
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Comment: C: ChIPQC v1.4 fails uninformatively where version 1.2 works fine
8.5 years ago Thomas Carroll ▴ 420
1
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0
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1.7k
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Answer: A: Confusing error when running ChIPQC
8.6 years ago Thomas Carroll ▴ 420
2
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0
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2.9k
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Answer: A: ChIPQC and broadPeak input
8.6 years ago Thomas Carroll ▴ 420
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0
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2.9k
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Comment: C: ChIPQC and broadPeak input
8.6 years ago Thomas Carroll ▴ 420
0
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0
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2.9k
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Answer: A: ChIPQC and broadPeak input
8.6 years ago Thomas Carroll ▴ 420
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1
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2.9k
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Comment: C: ChIPQC and broadPeak input
8.6 years ago Thomas Carroll ▴ 420
0
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0
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2.9k
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Answer: A: ChIPQC and broadPeak input
8.6 years ago Thomas Carroll ▴ 420
2
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0
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3.2k
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Answer: A: creating custom genome annotation for the ChIPQC package
8.7 years ago Thomas Carroll ▴ 420
0
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0
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2.3k
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Answer: A: ChIPQC v1.4 fails uninformatively where version 1.2 works fine
8.9 years ago Thomas Carroll ▴ 420
0
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0
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2.3k
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Comment: C: ChIPQC v1.4 fails uninformatively where version 1.2 works fine
8.9 years ago Thomas Carroll ▴ 420
2
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1
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2.3k
views
Answer: A: ChIPQC v1.4 fails uninformatively where version 1.2 works fine
9.0 years ago Thomas Carroll ▴ 420
1
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1
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2.1k
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Comment: C: ChIPQC: reads counts in bam do not match ones from samtools flagstat
9.1 years ago Thomas Carroll ▴ 420
0
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1
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2.1k
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Answer: A: ChIPQC: reads counts in bam do not match ones from samtools flagstat
9.1 years ago Thomas Carroll ▴ 420
0
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0
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3.8k
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Comment: C: ChIPQC failling when run ChIPQC() over 6 samples
9.1 years ago Thomas Carroll ▴ 420
0
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0
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3.8k
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Comment: C: ChIPQC failling when run ChIPQC() over 6 samples
9.1 years ago Thomas Carroll ▴ 420
1
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0
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3.8k
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Answer: A: ChIPQC failling when run ChIPQC() over 6 samples
9.1 years ago Thomas Carroll ▴ 420
1
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1
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3.8k
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Answer: A: ChIPQC failling when run ChIPQC() over 6 samples
9.1 years ago Thomas Carroll ▴ 420
0
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0
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3.8k
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Answer: A: ChIPQC failling when run ChIPQC() over 6 samples
9.1 years ago Thomas Carroll ▴ 420
0
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0
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3.2k
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Comment: C: Problem loading bamfiles to ChIPQC
9.3 years ago Thomas Carroll ▴ 420
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