User: Denise Scholtens

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Posts by Denise Scholtens

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Answer: A: factDesign - another question
... Hi again, The current version of factDesign (1.1.3) does contain log2 transformed values. I get the following - > library(factDesign) Loading required package: affy Welcome to Bioconductor Vignettes contain introductory material. To view, simply type: openVignette() ...
written 15.6 years ago by Denise Scholtens40
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Answer: A: factdesign package
... Hi Claire, The 500 probes are a random sample of the 12625 probes available on the U95av2 array. No biological interpretability here - this was done purely for size reasons so that the vignette would run a little faster. Denise On Tue, 4 May 2004, Claire Wilson wrote: > Dear all, > > ...
written 15.6 years ago by Denise Scholtens40
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Comment: C: [altirriba@hotmail.com: Design in factDesign] (fwd)
... I'm sorry I missed the difference between "*" and ":" previously - I always forget which means which. Kaspar is right - in statistics, it's not a good idea to fit an interaction between two terms in a linear model without including the main effects in the model as well. In the situation you descri ...
written 15.7 years ago by Denise Scholtens40
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[altirriba@hotmail.com: Design in factDesign] (fwd)
... Hello Jordi, My comments to your questions are below. I hope this helps. -Denise ______________________________________________________________________ ____ Denise Scholtens Department of Biostatistics Harvard School of Public Health dscholte@hsph.harvard.edu Hi all! I?ve been using RMA and LI ...
multtest limma factdesign written 15.7 years ago by Denise Scholtens40 • updated 15.7 years ago by Jordi Altirriba Gutiérrez350

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