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SVA behaving weirdly, system is computationally singular , problem with method leek only
SVA combat sva leek
updated 2.9 years ago by • 0 • written 7.0 years ago by ▴ 10
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Comment: C: Problem with WGCNA - Module-trait relationship
6.6 years ago amoltej ▴ 10
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1.8k
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Comment: C: Problem with WGCNA - Module-trait relationship
6.6 years ago amoltej ▴ 10
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4
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1.8k
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Problem with WGCNA - Module-trait relationship
wgcna
updated 6.6 years ago by ▴ 730 • written 6.6 years ago by ▴ 10
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2
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1.5k
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is it possible to before and after batch effect removal from the data and see that batch effect removal actually worked
combat sva batch effect comba
updated 7.5 years ago by ▴ 110 • written 7.5 years ago by ▴ 10
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2
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Comment: C: is it necessary to check batch effect in this case? and how to?
7.5 years ago amoltej ▴ 10
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2.2k
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Comment: C: is it necessary to check batch effect in this case? and how to?
7.5 years ago amoltej ▴ 10
3
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6
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2.2k
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is it necessary to check batch effect in this case? and how to?
svaseq combat sva RANseq batcheffect removebatcheffect
updated 7.5 years ago by ▴ 50 • written 7.5 years ago by ▴ 10
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Comment: C: Batch effect problem using SVA showing problems
7.7 years ago amoltej ▴ 10
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2
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1.2k
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Batch effect problem using SVA showing problems
SVA combat sva batch effect
updated 7.7 years ago by ▴ 650 • written 7.7 years ago by ▴ 10
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1
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2.5k
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Input file of NGS data for Pathview
rnaseq pathview data visualization
updated 8.5 years ago by ★ 1.6k • written 8.5 years ago by ▴ 10
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1.8k
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Comment: C: confusing output from EdgeR Glm
8.6 years ago amoltej ▴ 10
1
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3
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1.8k
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confusing output from EdgeR Glm
edger logfc pvalue
updated 8.6 years ago by ★ 28k • written 8.6 years ago by ▴ 10
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1.8k
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Comment: C: confusing output from EdgeR Glm
8.6 years ago amoltej ▴ 10
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1.6k
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Comment: C: edgeR output error and data frame setting
8.7 years ago amoltej ▴ 10
2
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6
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1.6k
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edgeR output error and data frame setting
EdgeR data.frame glmLRT
updated 8.7 years ago by 50k • written 8.7 years ago by ▴ 10
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1
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1.6k
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Comment: C: edgeR output error and data frame setting
8.7 years ago amoltej ▴ 10
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1
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1.6k
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Comment: C: edgeR output error and data frame setting
8.7 years ago amoltej ▴ 10
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1
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3.5k
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Answer: A: rsubread featurecounts returns 0% successfully assigned reads
8.7 years ago amoltej ▴ 10
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1
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16k
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Comment: C: featureCount - very less Successfully assigned reads
9.3 years ago amoltej ▴ 10
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16k
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Comment: C: featureCount - very less Successfully assigned reads
9.3 years ago amoltej ▴ 10
7
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6
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16k
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featureCount - very less Successfully assigned reads
featurecounts rsubread
updated 9.3 years ago by 65k • written 9.3 years ago by ▴ 10
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