User: cinderelliedoll

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EdgeR: Accounting for batch effects in a pairwise analysis
... Hello,  I am wondering what the correct way to define the design in the EdgeR workflow is for a pairwise analysis, while also accounting for batch effects, in terms of the design <- model.matrix(~x+y) term.  The setup of our experiment is quite simple: we have 18 cases who had blood RNA-seq bef ...
batcheffect paired written 4.8 years ago by cinderelliedoll0 • updated 4.8 years ago by Gordon Smyth39k

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