User: unmeshj

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unmeshj0
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Posts by unmeshj

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Answer: A: How to handle BSsmooth.tstat for single replicate samples? Error: need at least
... Hello Kasper,  Thank you very much for your quick reply.  By single-replicate-data, I mean I have only one data file for each of the 'Control'  and for 'Expt'. So, as you mention in your reply, I can not use the t-stat approach. I used the fisher test and got the results that give the pValue (unad ...
written 4.1 years ago by unmeshj0
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How to handle BSsmooth.tstat for single replicate samples? Error: need at least two non-NA values to interpolate
... Hello, I am working with Bsseq to find DMRs in single replicate samples (Control and Expt) from WGBS. The bsseq object creation and smoothing worked well. Although, I encounter errors in the BSmooth.tstat function. BS.OBJ.tstat = BSmooth.tstat(BS.OBJ.keep, group1="Control", group2="Expt", estimate. ...
bsseq bsmooth written 4.1 years ago by unmeshj0

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