User: richa_r

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richa_r0
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Posts by richa_r

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Answer: A: Problem Importing STAR fusion data into chimera
... Hi This perhaps is not directly but kind of related  to the issue been discussed here. So, I have used STAR for mapping using hg19 genome reference and Gencode v19 for annotation with the aim of detecting chimeric  junctions. I tried importing the STAR output into Chimera package for further filte ...
written 4.1 years ago by richa_r0
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Problem with gene annotation used in chimera package for fusion analysis
... hi I have used STAR aligner followed by Chimera package for further filtering with the aim to detect fusion genes. Now the issue is that I have used hg19 genome reference and Gencode v19 for annotation in STAR. But, perhaps the annotation used in Chimera (possibly UCSC known gene) is not the same. ...
annotation fusion genes chimera package written 4.1 years ago by richa_r0

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