User: shicks

gravatar for shicks
shicks30
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USA/Baltimore/Johns Hopkins
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https://www.stephanieh...
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stephaniehicks
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2 weeks, 1 day ago
Joined:
4 years, 1 month ago
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s*******@jhu.edu

Assistant Professor of Biostatistics at Johns Hopkins Bloomberg School of Public Health

Posts by shicks

<prev • 3 results • page 1 of 1 • next >
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Comment: C: Hope for help about quantro and qsmooth-library size normalization
... Do you think differences in the sequencing depth are related to biological or technical variation? If it's technical, `quantro` actually performs an ANOVA to test if the medians of the distributions are different across groups. There is a parameter in `quantro` (`useMedianNormalized = TRUE`) to ma ...
written 15 days ago by shicks30
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Job: Postdoctoral Scientist position at intersection of Single-Cell Cancer Genomics, Data Science and Bioconductor Software Development
... Johns Hopkins Bloomberg School of Public Health Department of Biostatistics Post-Doctoral Fellowship Opening Positions to begin Spring or Summer 2019 Applications Due: Open until filled, applications will be reviewed on a rolling basis and those received by January 31, 2018 will receive priority. ...
cancer job genomics data science single-cell written 6 months ago by shicks30
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Comment: C: DESeq2- Size factors (median of ratios) assumptions - global adjustment normaliz
... Thanks Mike! Yes, DESeq2 also makes assumptions that might not be appropriate if you have global differences in the distributions of data. As Mike suggested, do you have spike-ins?  ...
written 10 months ago by shicks30

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Autobiographer 4.2 years ago, has more than 80 characters in the information field of the user's profile.

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