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Posts by jiri.hon
... Why it is now impossible to replace a subset of DNAStringSet object by a different DNAStringSet object? This certainly worked before. Please, see the example below: > library(Biostrings) > dna_set <- DNAStringSet(c("CGT", "ACC")) > dna_set <- DNAStringSet("GGG") Error in c(x, val ...
... An attempt to export an empty GRanges object to GFF using export function from rtracklayer package fails. Is this behavior intended or is it a bug? > library(rtracklayer) > export(GRanges(), "test.gff", version = "3") Error in data.frame(seqname, source, feature, start(object), end(object), ...
... It seems like flowCore got unsynchronized with BH (Boost header) package. Our package pqsfinder that depends on both BH and flowCore is also affected. I hope flowCore maintainers will fix this as soon as possible. ...
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