User: chickenchamp4

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Posts by chickenchamp4

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Comment: C: Multiple Comparisons EdgeR
... Hi Ryan, I used the multiple coefficient approach and it worked! I have a couple follow up questions: 1. How can you get all of the values from the lrt? It limits me to only a few of the top Tags? 2. For these top genes the P values and FDR values are zero. Is this a rounded zero or is it actuall ...
written 3.5 years ago by chickenchamp410
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Multiple Comparisons EdgeR
... Hi, I am trying to compare between 10 groups each with two replicates (RNA-seq data). I wish to determine the genes which distinguish each individual apart from one another. So far looking through the edgeR manual I have not found a way to compare all of the groups at once in order to obtain values ...
edger anova glm multiple comparisons written 3.5 years ago by chickenchamp410 • updated 3.5 years ago by Ryan C. Thompson7.0k

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