User: mk.applebee

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Posts by mk.applebee

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Comment: C: merge fastq.gz in R? (or in Windows?)
... Thank you!  This worked great.  I looked at the ShortRead package, but I only saw that it was used for sampling.  Much appreciated! ...
written 3.7 years ago by mk.applebee0
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merge fastq.gz in R? (or in Windows?)
... I have RNAseq libraries of 28 samples, and I got 2-4 fastq.gz files from each sample. I am just trying to figure out how to merge them.  I have already done what I feels is a due-diligence search of the bioconductor tutorials and google, and so far it appears that there is no way in r + windows to e ...
rnaseq bioconductor fastq written 3.7 years ago by mk.applebee0
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Comment: C: EBImage crashing in for-loop
... Thank you very much for the patch!  Everything is working beautifully now. ...
written 3.7 years ago by mk.applebee0
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Comment: C: 'Codetools' and 'mgcv' packages fail to update
... Also, the "y" question pops up in a separate windows screen that sometimes appears behind the Rstudio window.  I almost gave up thinking that my computer was frozen, and was googling for more solutons when I finally found it and was able to click "Yes" and move on with my life ...
written 3.7 years ago by mk.applebee0
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Comment: C: EBImage crashing in for-loop
... thank you!  here is a dropbox link, and the original post has been updated ...
written 3.7 years ago by mk.applebee0
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EBImage crashing in for-loop
... I have a script that uses EBImage to identify and measure a swarming colony in series of time-lapse photos. When I run this script, it usually crashes. The number of cycles it takes to crash changes between runs, though it usually crashes at a step where computeFeatures.moment and computeFeatures.sh ...
ebimage image analysis crash written 3.7 years ago by mk.applebee0 • updated 3.7 years ago by Andrzej Oleś720

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Popular Question 2.5 years ago, created a question with more than 1,000 views. For merge fastq.gz in R? (or in Windows?)

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