User: ale.breschi

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ale.breschi10
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Posts by ale.breschi

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Comment: C: voom + removeBatchEffect + gene clustering
... Thanks for the prompt response! ...
written 3.7 years ago by ale.breschi10
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voom + removeBatchEffect + gene clustering
... Dear Dr. Smyth, We are analyzing some RNA-seq samples collected in different batches, where the batch is a known variable. To account for that we reasoned we could use a linear model to include the batch effect and then remove it.  Since the voom+limma approach is shown to work well for differenti ...
clustering limma voom removebatcheffect() batch effect written 3.7 years ago by ale.breschi10 • updated 3.7 years ago by Gordon Smyth36k

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