User: dave

gravatar for dave
dave10
Reputation:
10
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New User
Location:
United States
Last seen:
3 years ago
Joined:
3 years, 11 months ago
Email:
d***@trudgian.net

Posts by dave

<prev • 4 results • page 1 of 1 • next >
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Answer: A: Can not install 'affyio' with compiler icc on redhat linux ES5
... Dragging up an old thread, but this issue exists for us when using Intel Composer XE 2015 to build our R install for our HPC system, so thought I'd note it here as this thread is the top google result. Simple fix is to edit the code to set PTHREAD_STACK_MIN to 16384  - which is the default in Linux ...
written 3.0 years ago by dave10
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Answer: A: 'version' is missing error when running makeTxDbPackageFromUCSC
... Sorry for delay. This is looking good to me now. Just installed with an intel compiled R via biocLite() into personal library and then:   > library(S4Vectors) ...... > svn.time() [1] "2015-10-29 10:30:45 -0500 (Thu, 29 Oct 2015)"   Cheers, DT ...
written 3.7 years ago by dave10
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Comment: C: 'version' is missing error when running makeTxDbPackageFromUCSC
... Sorry for not having replied before now - I've made a note to try this on Monday on our systems with the Intel compiler. Thanks! ...
written 3.7 years ago by dave10
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Answer: A: 'version' is missing error when running makeTxDbPackageFromUCSC
... Hi, Just came across this issue on our cluster which is using an intel compiled version of R. Since the problem is timezone related, perhaps a suitable patch would be to just return UTC times when the intel compiler is in use. These won't be incorrect, just a little less friendly. Something like t ...
written 4.0 years ago by dave10

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