User: sg45653

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sg456530
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Posts by sg45653

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Data format for package "edge"
... I am interested in using the  Bioconductor package, "edge", for differential gene expression analysis of a timecourse dataset. Being relatively new to R, I am unclear how the data should be formatted and imported into the software. The examples provided with the 'kidney' and 'endotoxin' datasets do ...
dataimport data handling written 3.2 years ago by sg456530 • updated 3.2 years ago by James W. MacDonald50k
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Using limma when continuous and categorical confounders are present at the same time (e.g.age, gender)
... Hello,  I have an Affymetrix microarray dataset where the goal of analysis is to identify genes significantly associated with a continous response (bvo2mxkg). Age (numeric), sex (categorical) and body mass index (numeric) are "confounders", for the purposes of analysis. I am wondering if the follow ...
limma covariate continuous categorical adjustment written 3.8 years ago by sg456530 • updated 3.8 years ago by Gordon Smyth37k

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