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questions
1
vote
4
replies
3.4k
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Looking for Batch effects in PCA
batch effect
pca
5.8 years ago • updated 15 months ago
KB
▴ 50
0
votes
1
reply
938
views
Gene ontology enrichment
GO
Gene ontology
updated 6.3 years ago by
James W. MacDonald
65k • written 6.3 years ago by
KB
▴ 50
0
votes
5
replies
1.4k
views
Extracting all possible annotations between two genomic coordinates
genomes
7.2 years ago
KB
▴ 50
0
votes
2
replies
2.7k
views
subset from fastq file
fastq
7.6 years ago
KB
▴ 50
0
votes
2
replies
1.2k
views
how to get transcript annotation (unique)
txdb
8.0 years ago
KB
▴ 50
1
vote
2
replies
6.4k
views
HTseq in bioconductor
rnaseq
bioconductor
8.2 years ago
KB
▴ 50
3
votes
3
replies
1.6k
views
Read in specific rows of a BAM file that match a certain RNAME
scanbamparam
bam
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
KB
▴ 50
0
votes
3
replies
1.8k
views
how to get complete cds annotation information ?
cds
8.4 years ago
KB
▴ 50
5
votes
9
replies
4.2k
views
Looking for annotation file for Affymetrix SNP 6.0
copynumber
snp
affymetrix
8.4 years ago
KB
▴ 50
2
votes
7
replies
4.3k
views
how to use apply instead of nested for loop
apply
for
loop
8.4 years ago
KB
▴ 50
1
vote
9
replies
2.7k
views
need help manipulating fastq file
fastq
updated 8.6 years ago by
Martin Morgan
25k • written 8.6 years ago by
KB
▴ 50
0
votes
5
replies
2.7k
views
example fastq file, sampleAnnotaition and Hairpin file for shRNAseq/EdgeR tool
shRNAseq
edgeR
shRNA
updated 8.6 years ago by
Gordon Smyth
50k • written 8.6 years ago by
KB
▴ 50
3
votes
2
replies
2.5k
views
how to download multiple gff files from NCBI
gff
updated 8.7 years ago by
Martin Morgan
25k • written 8.7 years ago by
KB
▴ 50
0
votes
5
replies
4.5k
views
bioconductor package for BWA-MEM ?
bwa
ngs
updated 8.7 years ago by
Gordon Smyth
50k • written 8.7 years ago by
KB
▴ 50
3
votes
2
replies
1.3k
views
question regarding embedding images in vignette when creating bioconductor package
vignette
updated 8.7 years ago by
Dan Tenenbaum
★ 8.2k • written 8.7 years ago by
KB
▴ 50
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