User: February
February • 0
- Reputation:
- 0
- Status:
- New User
- Last seen:
- 3 years, 10 months ago
- Joined:
- 4 years, 3 months ago
- Email:
- 9********@qq.com
Profile information, website and location are not shown for new users.
This helps us discourage the inappropriate use of our site.
Posts by February
<prev
• 4 results •
page 1 of 1 •
next >
0
votes
5
answers
4.0k
views
5
answers
Answer:
A: question about DiffBind
... hi My command line as follows:
>diff <- dba(sampleSheet="sample.csv")
> head(diff$vectors)
CHR START END A_K2 B_H3
1 1 24611508 24613285 0.66803548 0.51411935
2 1 172350354 172351110 0.02988387 0.02449355
3 1 183299111 183299590 0.11737097 0.2310032 ...
written 4.3 years ago by
February • 0
0
votes
5
answers
4.0k
views
5
answers
Answer:
A: question about DiffBind
... hi Rory
Thank you for your advice and details. It really helped me a lot.
And here I havd another question about dba.count().In DiffBind reference manual,you had saied "DiffBind can use the supplied sequence read files to count how many reads overlap each interval for each unique sample. The resul ...
written 4.3 years ago by
February • 0
1
vote
5
answers
4.0k
views
5
answers
... hi Rory,
I'm a new with DiffBind for di fferential binding analysis of ChIP-Seq peak data.I want to write command line for my work.But always print error.I really don't understant with dba.contrast and dba.mask.
I have 4 samples with chip-experiment,they are A_K2、B_T1、B_T3 and B_H3.And I have g ...
written 4.3 years ago by
February • 0
• updated
4.3 years ago by
Rory Stark • 3.0k
0
votes
3
answers
2.2k
views
3
answers
... hi Gord
I am a new and my DiffBind installation also doesn't work.The problem is as follows:
> library("DiffBind")
Loading required package: GenomicAlignments
Loading required package: Biostrings
Error in unloadNamespace(package) :
namespace ?.iostrings?.is imported by ?.enomicAlignments?. ? ...
written 4.3 years ago by
February • 0
Latest awards to February
Popular Question
3.9 years ago,
created a question with more than 1,000 views.
For question about DiffBind
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 16.09
Traffic: 202 users visited in the last hour