User: wrab425

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wrab4250
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Posts by wrab425

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Comment: C: cannot get GRanges() to load
... I was wrong; it seemed to have loaded but when I came to load GRnages() it could not be seen. > biocLite("GenomeInfoDbData") BioC_mirror: https://bioconductor.org Using Bioconductor 3.5 (BiocInstaller 1.26.1), R 3.4.1 (2017-06-30). Installing package(s) ‘GenomeInfoDbData’ installing the sour ...
written 12 months ago by wrab4250
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Comment: C: cannot get GRanges() to load
... Thanks That was helpful I just needed to use biocLite("GenomeInfoDbData"). It was the inverted commas that were missing.   ...
written 12 months ago by wrab4250
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cannot get GRanges() to load
... I am starting Bioconductor by following Kasper Hansens lectures. Now I cannot get the GenomicRanges library to load. I can see the package in my package tab in R studio so it seems to be there but it will not run. I loaded biocLite() freshly to start . There seems to be a problem with GenomeInfoDb() ...
genomicranges written 12 months ago by wrab4250 • updated 12 months ago by nitesh.turaga130
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library(VariantAnnotation) download difficulties
... I have just downloaded the bioconductor packages using the bioclite R script and wanted to use the library Variant Annotation.   I typed library(VariantAnnotation) and received the following error messages: Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) ...
variantannotation written 3.0 years ago by wrab4250 • updated 3.0 years ago by Valerie Obenchain ♦♦ 6.6k

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