User: brenna.hott

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Posts by brenna.hott

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I am getting a champ error during BatchNorm
... Hello, Here is part of my sample sheet. I am wondering if I need more info here to normalize the batch. I have 3 chips in the batch, all the same group, all medulloblastomas.               [Data]             Sample_Name Sample_Well ...
champ illumina methylationepic 450k written 3.2 years ago by brenna.hott0
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Comment: C: rnBeads error for the report path
... R version 3.2.2 (2015-08-14) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1 locale: [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252    LC_MONETARY=English_United States.1252 [4] LC_NUMERIC=C                           ...
written 3.7 years ago by brenna.hott0
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rnBeads error for the report path
... Hello,  I am getting this error even though this path does not exist. Is there something I am missing? rnb.run.analysis(dir.reports=report.dir, sample.sheet=sample.annotation, + data.dir=idat.dir, data.type="infinium.idat.dir") Error in rnb.run.analysis(dir.reports = report.dir, sample.sheet = sam ...
software error rnbeads written 3.9 years ago by brenna.hott0 • updated 3.9 years ago by Dan Tenenbaum8.2k

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