User: y-kuwahara

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y-kuwahara0
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Posts by y-kuwahara

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Comment: C: SNP extraction from SNPlocs.Hsapiens.dbSNP144.GRCh38
... Hi Herve,   Thanks for your response. It would be very helpful and I could find the SNPs in ds_flat_chMulti.flat.gz file. I hope you will update SNPlocs packages. Thank you for your help, Yusuke ...
written 3.5 years ago by y-kuwahara0
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SNP extraction from SNPlocs.Hsapiens.dbSNP144.GRCh38
... Hi,   I'm trying to extract all snps on TNF transcript from SNPlocs.Hsapiens.dbSNP144.GRCh38, but only one is returned (rs281865419). In the NCBI variation viewer, there are 255 snps. Is my code right? And is there a better approach? My code and sessionInfo are below. Many thanks,  Yusuke --- ...
dbsnp written 3.5 years ago by y-kuwahara0 • updated 3.5 years ago by Hervé Pagès ♦♦ 13k

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