User: Bob Thurman

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Posts by Bob Thurman

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Comment: C: replicates and groups of samples: what's the right DESeq2 model?
... Very helpful, Gavin and Michael; thank you! ...
written 17 months ago by Bob Thurman0
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replicates and groups of samples: what's the right DESeq2 model?
... Hi, I’m having some difficulty with what would seem to be a pretty basic set-up.  I have a panel of, say, 20 cell lines, c1, c2, …,c20, with two replicates for each cell line, so 40 samples total.  The cell lines can be divided into groups based on different phenotypic properties and I’d like to do ...
rnaseq deseq2 differential gene expression written 17 months ago by Bob Thurman0 • updated 17 months ago by Gavin Kelly560

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