User: lovetatting

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lovetatting10
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Sweden
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3 years, 3 months ago
Joined:
3 years, 11 months ago
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Posts by lovetatting

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Comment: C: on extend_val parameter in parseWorkspace
... A bit late, but for anyone reading this, you should of course go with Mike's answer. Good insight in link.  I didn't see the effect on flowCore numbers as I always use the flowJo numbers for statistics.    ...
written 3.3 years ago by lovetatting10
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Answer: A: Trouble parsing a workspace in flowWorkspace
... HI, I understand that you don't have any sample groups in your FlowJo-file other than "All Samples" and that it works fine when you do it interactively, but not when you try to do it in call to parseWorkspace.  The offending code is at 216 in flowWorkspace-Methods.R So, what's happening is that w ...
written 3.6 years ago by lovetatting10
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on extend_val parameter in parseWorkspace
... Thanks for a great package! I've had some problems I've managed to fix by tweaking the extend_val parameter of parseWorkspace. I would sometimes get an error "try to extend the coordinates for ellipse gate!". I think this emerged from line 320 in gate.cpp. I didn't understand it at first, but it w ...
flowworkspace written 3.6 years ago by lovetatting10 • updated 3.6 years ago by Jiang, Mike1.2k
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Comment: C: flowWorkspace doesn't allow channels that are named as subset (edit: substring)
... Works like a charm! Greatly thankful for your help! ...
written 3.9 years ago by lovetatting10
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flowWorkspace doesn't allow channels that are named as subset (edit: substring) of other (PE-A and PE-Alexa Fluor 700-A eg.)
...   Thanks for a great package! I had a great experience with it, but came across an error on parsing a particular .wsp-file.  I have located the error to line 575 in R/GatingSet-Methods where I figure retrieved compensation data is checked against the actual data of the FCS-files. The offending co ...
flowworkspace written 3.9 years ago by lovetatting10 • updated 3.9 years ago by Jiang, Mike1.2k

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