User: b.tawk

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b.tawk0
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Posts by b.tawk

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Comment: C: preprocessFunnorm in minfi
... Super! Thank you very much! Best, B ...
written 3.9 years ago by b.tawk0
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Comment: A: preprocessFunnorm in minfi
... Thank you for the reply! There is a small discrepancy in 2/100 samples (something that can be expected to happen in clinical databases) but otherwise, in all the other samples, the predictedSex matches the clinical annotation.   ...
written 3.9 years ago by b.tawk0
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preprocessFunnorm in minfi
... Hi everyone, I am relatively new to R. I am working with 450K and trying to normalize my data using the minfi package. Besides the QC, checking for bad probes, these are the following steps I use: require(minfi) require(minfiData) base="XYZ" targets <- read.450k.sheet(base) RGset <- read.45 ...
normalization minfi illuminahumanmethylation450k.db 450k written 3.9 years ago by b.tawk0 • updated 3.9 years ago by James W. MacDonald51k

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