User: liangc.mu

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liangc.mu0
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Posts by liangc.mu

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Comment: C: local versus parametric fitType in DESeq2
... Thank you very much your quick response of my question. We did filter out genes with summation of counts: rowSum=0.  Among three treatments, we find two treatments have high variations in gene expression among their 3 replicates and one treatment has small variations among its 3 replicates. We fin ...
written 2.6 years ago by liangc.mu0
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local versus parametric fitType in DESeq2
... For differential gene expression analysis of three treatments, each of which has three replicates, we find the results are different when we used fitType="local" versus fitType="parametric" in DESeq2.  For the given two fitting results of dispersion estimates, can anyone tell me which graph looks be ...
deseq2 written 2.6 years ago by liangc.mu0 • updated 2.6 years ago by Michael Love26k
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Bioconductor installation problem
... I encountered a problem when I installed Bioconductor in Ubuntu 14.04.  Here is the error information I have.  Any comment or suggestion will be highly appreciated.  > biocLite() BioC_mirror: http://bioconductor.org Using Bioconductor version 3.0 (BiocInstaller 1.16.5), R version 3.2.3. Old pa ...
bioclite installation written 3.9 years ago by liangc.mu0 • updated 3.9 years ago by Martin Morgan ♦♦ 24k

Latest awards to liangc.mu

Popular Question 2.6 years ago, created a question with more than 1,000 views. For local versus parametric fitType in DESeq2
Popular Question 2.6 years ago, created a question with more than 1,000 views. For Bioconductor installation problem

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