User: Bstn132

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Bstn1320
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Posts by Bstn132

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Comment: C: DEseq2 - Use normalized DEseq2 counts to plot most expressed genes per group
... Thank you so much. I had read those sections, but after re-reading them and reading the DEseq2 paper it made more sense. For clustering of samples and displaying the highest expressed genes I will use the rlog transformed counts. ...
written 3.6 years ago by Bstn1320
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DEseq2 - Use normalized DEseq2 counts to plot most expressed genes per group
... I’m working on RNAseq data using the DEseq2 R package. Most of the analysis will be differential expression between 2 (or 3) groups of samples with at least 3 biological replicates. Before displaying the differential expression of certain groups of genes, I would like to plot a heatmap of the, for ...
rnaseq deseq2 R written 3.6 years ago by Bstn1320 • updated 3.6 years ago by Michael Love25k

Latest awards to Bstn132

Great Question 3.6 years ago, created a question with more than 5,000 views. For DEseq2 - Use normalized DEseq2 counts to plot most expressed genes per group
Popular Question 3.6 years ago, created a question with more than 1,000 views. For DEseq2 - Use normalized DEseq2 counts to plot most expressed genes per group

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