User: ecekartal89

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ecekartal8920
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Posts by ecekartal89

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Answer: A: ribosome profiling and rna seq data with Deseq2 package
... Hi Michael, Thank you for your answer, yes, I want to see which genes with RP/mRNA ratio different across age. I have tried to use two conditions design from DeSeq2. Does it make sense? > dds<-DESeqDataSetFromMatrix(countData=countData,colData=conditions,design = ~ biol + age + biol:age) &g ...
written 3.1 years ago by ecekartal8920
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ribosome profiling and rna seq data with Deseq2 package
... Hi all, I have a dataset and people who worked with that dataset used Deseq and now I want to use Deseq2 and compare the results. However I am a bit confused. I have RNA seq and ribosome profiling data from same tissue. How I can use Deseq2 for ribosome profiling data. Do I need to add some normali ...
deseq2 written 3.1 years ago by ecekartal8920 • updated 3.1 years ago by Bernd Klaus540

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Popular Question 3.1 years ago, created a question with more than 1,000 views. For ribosome profiling and rna seq data with Deseq2 package

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