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Answer: Answer: geneList error in clusterprofiler
3 hours ago Basti ▴ 760
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1
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367
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Answer: Answer: Obtaining pheno data from CEL files
14 days ago Basti ▴ 760
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0
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608
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Answer: Answer: Error when trying to create a heatmap with DESeq2
5 months ago Basti ▴ 760
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1
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516
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Answer: Answer: minfi bumphunter - probe IDs
6 months ago Basti ▴ 760
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0
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427
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Answer: Answer: Create design matrix for differential methylation analysis
6 months ago Basti ▴ 760
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394
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Answer: Answer: Model matrix not full rank
8 months ago Basti ▴ 760
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0
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541
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Answer: Answer: library(topGO) query
8 months ago Basti ▴ 760
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1
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755
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Answer: Answer: Creating heatmaps with 2 Log Fold Changes in DESEQ2
9 months ago Basti ▴ 760
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0
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743
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Answer: Answer: DESeq2 design formula
9 months ago Basti ▴ 760
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0
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458
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Answer: Answer: plotCounts label each sample
9 months ago Basti ▴ 760
1
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1
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855
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Answer: Answer: Problem in running DESeq from expected count data of Transcriptome by Trinity fo
11 months ago Basti ▴ 760
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405
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Answer: Answer: deseq2 nested multifactorial analysis
13 months ago Basti ▴ 760
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2
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915
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Answer: Answer: No enriched GO terms CpGs
13 months ago Basti ▴ 760
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0
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710
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Answer: Answer: champ.load IDAT files from subdirectories
13 months ago Basti ▴ 760
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2
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2.6k
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Answer: Answer: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
13 months ago Basti ▴ 760
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2
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1.8k
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Answer: Answer: Problem with universe argument in enrichKEGG
13 months ago Basti ▴ 760
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1.2k
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Answer: Answer: Volcano plot becomes flipped when I add a third condition
14 months ago Basti ▴ 760
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0
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975
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Answer: Answer: Rename colData column
14 months ago Basti ▴ 760
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1
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1.5k
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Answer: Answer: PlotCounts DESeq2 - how to plot count s for specific samples?
14 months ago Basti ▴ 760
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722
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Answer: Answer: Adding gene names to DESeq result
14 months ago Basti ▴ 760
3
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0
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2.0k
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Answer: Answer: MA plot
14 months ago Basti ▴ 760
2
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2
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2.8k
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Answer: Answer: ComplexHeatmap - Default distance and hierarchical clustering methods
14 months ago Basti ▴ 760
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0
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479
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Answer: Answer: empty values when extracting beta values using the GEOquery
17 months ago Basti ▴ 760
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1
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1.3k
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Answer: Answer: ChAMP package:Error in cmdscale(d) : 'k' must be in {1, 2, .. n - 1}
17 months ago Basti ▴ 760
1
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0
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565
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Answer: Answer: Downloading DESeq package manually
18 months ago Basti ▴ 760
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0
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746
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Answer: Answer: Issue with installation of a package.
18 months ago Basti ▴ 760
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0
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531
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Answer: Answer: Champ.impute - myLoad not found
18 months ago Basti ▴ 760
2
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1
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666
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Answer: Answer: data import error
20 months ago Basti ▴ 760
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0
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522
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Answer: Answer: Differentially expressed genes from Deseq2 have similar counts
20 months ago Basti ▴ 760
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1
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11k
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Answer: Answer: Install DESeq2
20 months ago Basti ▴ 760
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0
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1.2k
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Answer: Answer: I want to know how to analyze TCGA data with maftools.
21 months ago Basti ▴ 760
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0
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956
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Answer: Answer: error in champ.SVD() "Error in summary(lm(svd.o$v[, c] ~ PhenoTypes.lv[[f]]))$c
21 months ago Basti ▴ 760
3
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1
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903
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Answer: Answer: DESeq2 is renaming gene names and lack of downregulated genes
21 months ago Basti ▴ 760
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1
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2.6k
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Answer: Answer: DESeq2 different log2FC and p-value filtering parameters results comparison
21 months ago Basti ▴ 760
0
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1
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793
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Answer: Answer: DeSeq2 Matched Analysis
21 months ago Basti ▴ 760
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0
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520
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Answer: Answer: Error "DESeqDataSetFromMatrix" function not found
21 months ago Basti ▴ 760
1
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0
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486
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Answer: Answer: roughDispEstimate and momentsDispEstimate
22 months ago Basti ▴ 760
1
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1
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1.0k
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Answer: Answer: Error in DESeqDataSetFromMatrix
22 months ago Basti ▴ 760
0
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0
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940
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Answer: Answer: How do I remove the outlier probes highlighted in the plotSA function of limma
22 months ago Basti ▴ 760
0
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0
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867
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Answer: Answer: what is the format of DMPfinder in minfi package
22 months ago Basti ▴ 760
0
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1
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1.3k
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Answer: Answer: regression analysis for epic array methylation data using limma
23 months ago Basti ▴ 760
3
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1
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1.3k
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Answer: Answer: toGRanges help!
23 months ago Basti ▴ 760
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1
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3.3k
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Answer: Answer: Error in DESeqDataSet(se, design = design, ignoreRank) : all variables in des
23 months ago Basti ▴ 760
0
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0
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2.5k
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Answer: Answer: Cannot install DESeq2 to R 4.2 version
23 months ago Basti ▴ 760
0
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0
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3.0k
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Answer: Answer: Extract genes from ggvenn?
23 months ago Basti ▴ 760
0
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2
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9.6k
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Answer: Answer: Error: package or namespace load failed for ‘DESeq2’ in loadNamespace(j <- i[[1L
24 months ago Basti ▴ 760
0
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0
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945
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Answer: Answer: finding overlap using GenomicRanges with two data sets specifying minoverlap Fun
2.0 years ago Basti ▴ 760
2
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0
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776
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Answer: Answer: DESeq2
2.0 years ago Basti ▴ 760
2
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0
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1.1k
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Answer: Answer: Getting error Creating SingleCellExperiment instances "all assays must have the
2.0 years ago Basti ▴ 760
0
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0
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830
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Answer: Answer: How to control for confounders in champ.DMP and champ.DMR?
2.0 years ago Basti ▴ 760
62 results • Page 1 of 2
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