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DelayedArray
•
reset
1
vote
5
replies
1.7k
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rowsum or similar for RleArray?
delayedarray
rowsum
written 6.7 years ago by
maltethodberg
▴ 180
1
vote
6
replies
807
views
DelayedArray::read_sparse_block
DelayedArray
updated 7 months ago by
Hervé Pagès
16k • written 9 months ago by
Koki
▴ 10
2
votes
4
replies
1.7k
views
SummarizedExperiment is now warning on attach about `read_block` namespace conflict
SummarizedExperiment
S4Arrays
DelayedArray
updated 11 months ago by
Hervé Pagès
16k • written 12 months ago by
Michael Steinbaugh
▴ 90
4
votes
13
replies
1.9k
views
Speeding up of DelayedArray::write_block()
HDF5Array
DelayedArray
updated 7 months ago by
Hervé Pagès
16k • written 2.7 years ago by
Koki
▴ 10
1
vote
1
reply
1.0k
views
Could not find function ".read_block_OLD"
DelayedArray
S4Arrays
updated 12 months ago by
Hervé Pagès
16k • written 12 months ago by
xiuwen.zheng
• 0
0
votes
8
replies
1.1k
views
Support of parquet files for on-disk Bioconductor objects
DelayedArray
TileDBArray
8 months ago
sandmann.t
▴ 70
2
votes
5
replies
990
views
SparseArray unable to install on Bioc 3.18
DESeq2
SummarizedExperiment
SparseArray
Install
DelayedArray
updated 6 months ago by
Michael Love
42k • written 6 months ago by
eg226
• 0
7 results • Page
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Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
Thank you for advice, you mean I need to add: countdata_rat <- data.frame(condition = as.factor(METADATA_RAT$treatment)) and total: dds_…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
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