Showing : annbuilder • reset
0
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899
views
error message relating to png file when running maQualityPlots
AnnBuilder AnnBuilder
updated 11.4 years ago by ★ 8.2k • written 11.4 years ago by ▴ 20
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2
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1.1k
views
AnnBuilder not available
AnnBuilder AnnBuilder
12.7 years ago Carl Baribault ▴ 30
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2
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1.1k
views
AnnBuilder?
Annotation AnnBuilder Annotation AnnBuilder
updated 14.5 years ago by ★ 2.0k • written 14.5 years ago by ▴ 280
2
votes
5
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1.6k
views
building a new annotation
Annotation AnnBuilder AnnotationDbi Annotation AnnBuilder AnnotationDbi
updated 15.2 years ago by ★ 7.2k • written 15.2 years ago by ▴ 10
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816
views
Creating annotation packages
miRNA Annotation AnnBuilder AnnotationDbi miRNA Annotation AnnBuilder AnnotationDbi
15.2 years ago Gábor Csárdi ▴ 60
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3
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1.1k
views
Creating annotation packages
miRNA Annotation AnnBuilder miRNA Annotation AnnBuilder
updated 15.3 years ago by 21k • written 15.3 years ago by ▴ 60
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0
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892
views
adding KEGG annotations with ABPkBuilder from E.coli
Annotation annotate AnnBuilder PROcess Category Annotation annotate AnnBuilder PROcess
15.6 years ago Marc Carlson ★ 7.2k
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5
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1.6k
views
newbie problems with AnnBuilder
Annotation Organism cdf probe affy AnnBuilder Annotation Organism cdf probe affy
updated 15.6 years ago by ★ 7.2k • written 15.6 years ago by ▴ 830
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1
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1.4k
views
ACCNUM match zero using AnnotationDBI package
GO ChipName AnnBuilder AnnotationDbi GO ChipName AnnBuilder AnnotationDbi
updated 15.6 years ago by ★ 7.2k • written 15.6 years ago by ▴ 120
0
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1
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1.4k
views
GOstats-compatible annotation package for Helicobacter pylori 26995
Annotation AnnBuilder GOstats topGO Annotation AnnBuilder GOstats topGO
updated 15.6 years ago by ★ 7.2k • written 15.6 years ago by ▴ 70
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9
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1.6k
views
How are GO2PROBE built
GO probe AnnBuilder GO probe AnnBuilder
updated 15.7 years ago by 21k • written 15.7 years ago by ▴ 30
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2
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1.4k
views
GO over representation analysis
Annotation Pathways GO Organism db0 AnnBuilder PROcess maanova AnnotationDbi Annotation
updated 15.7 years ago by ▴ 220 • written 15.7 years ago by ★ 7.2k
0
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1
reply
954
views
ABPkgBuilder question
Organism AnnBuilder Organism AnnBuilder
updated 15.8 years ago by ★ 7.2k • written 15.8 years ago by ▴ 40
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0
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635
views
bovine Annotation package(s)
AnnBuilder AnnBuilder
15.8 years ago Marc Carlson ★ 7.2k
0
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5
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1.2k
views
bovine Annotation package(s)
AnnBuilder AnnBuilder
updated 15.9 years ago by 21k • written 15.9 years ago by ▴ 210
0
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2
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1.5k
views
agilent zebrafish array annotation
Annotation zebrafish AnnBuilder PROcess AnnotationDbi Annotation zebrafish AnnBuilder
16.1 years ago Georg Otto ▴ 510
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0
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1.2k
views
BioConductor Developer Workshop Lausanne 2008 Info
SNP Annotation annaffy AnnBuilder biomaRt cellHTS2 SNP Annotation annaffy AnnBuilder
16.3 years ago Darlene Goldstein ▴ 230
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905
views
another quick question about Illumina annotation
Annotation AnnBuilder lumi Annotation AnnBuilder lumi
16.4 years ago Pan Du ★ 1.2k
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2
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1.5k
views
biomaRt getBM errors
Annotation GO annotate AnnBuilder GOstats biomaRt Annotation GO annotate AnnBuilder
updated 16.5 years ago by 66k • written 16.5 years ago by ▴ 10
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0
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832
views
AnnBuilder problem
Organism annotate AnnBuilder Organism annotate AnnBuilder
16.6 years ago Yihuan Xu ▴ 130
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2
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1.1k
views
AnnBuilder: problem with kegg url?
Annotation GO Organism annotate AnnBuilder Annotation GO Organism annotate AnnBuilder
updated 16.7 years ago by ★ 7.2k • written 16.7 years ago by ▴ 20
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votes
2
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1.2k
views
AnnBuilder questions
Annotation GO Yeast hgu95av2 probe geneplotter AnnBuilder Annotation GO Yeast hgu95av2
updated 16.8 years ago by ★ 7.2k • written 16.8 years ago by ▴ 30
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votes
2
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1.2k
views
AnnBuilder problem
Organism annotate AnnBuilder Organism annotate AnnBuilder
updated 16.8 years ago by 25k • written 16.8 years ago by ▴ 130
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votes
5
replies
1.4k
views
AnnBuilder problem with custom List of genes
Annotation Organism probe AnnBuilder Annotation Organism probe AnnBuilder
16.8 years ago claudio.is@libero.it ▴ 210
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votes
1
reply
889
views
AnnBuilder: ABPkgBuilder gives missing GO and NAs in ACCNUM
Annotation GO probe annotate AnnBuilder Annotation GO probe annotate AnnBuilder
updated 16.9 years ago by ★ 7.2k • written 16.9 years ago by ▴ 10
0
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1
reply
954
views
question regarding ncbi gene2accession and annbuilder
Annotation AnnBuilder biomaRt Annotation AnnBuilder biomaRt
updated 16.9 years ago by ▴ 70 • written 16.9 years ago by ▴ 830
0
votes
1
reply
740
views
problem with annbuilder
Annotation Organism AnnBuilder Annotation Organism AnnBuilder
updated 16.9 years ago by ▴ 70 • written 16.9 years ago by ▴ 10
0
votes
1
reply
898
views
AnnBuilder and tab delimited files annotation
Annotation probe AnnBuilder Annotation probe AnnBuilder
updated 17.0 years ago by 21k • written 16.9 years ago by ▴ 500
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2
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1.3k
views
AnnotationDbi package only available for R 2.6.0 or higher version?
Annotation annotate AnnBuilder AnnotationDbi Annotation annotate AnnBuilder AnnotationDbi
updated 17.0 years ago by 21k • written 17.0 years ago by ▴ 450
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3
replies
1.3k
views
Building the tomato annotation library(Affy)
Annotation Organism AnnBuilder Annotation Organism AnnBuilder
17.1 years ago Groot, Philip de ▴ 630
0
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1
reply
824
views
Re : bug with AnnBuilder and parser
annotate AnnBuilder annotate AnnBuilder
17.1 years ago Nianhua Li ▴ 870
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3
replies
1.3k
views
Annotation of U95av2 array
Microarray Genetics Annotation GO Cancer hgu95av2 probe affy AnnBuilder PROcess Genetics
updated 17.1 years ago by ▴ 870 • written 17.1 years ago by 66k
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580
views
(no subject)
Annotation AnnBuilder Annotation AnnBuilder
17.1 years ago Mayte Suarez-Farinas ▴ 510
0
votes
1
reply
904
views
Problems in AnnBuilder package function ABPkgBuilder
Annotation GO rat2302 probe Biobase annotate AnnBuilder PROcess Annotation GO rat2302
updated 17.2 years ago by ▴ 870 • written 17.2 years ago by ▴ 70
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3
replies
1.1k
views
annotations for Codelink arrays
Annotation GO Cancer r10kcod probe AnnBuilder PROcess biomaRt codelink Annotation GO
updated 17.2 years ago by ▴ 760 • written 17.2 years ago by ★ 1.2k
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0
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848
views
Failed to obtain KEGG organism code
AnnBuilder AnnBuilder
17.2 years ago Nianhua Li ▴ 870
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0
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564
views
Builing annotation package with AnnBuilder using gene symbol
Annotation Cancer probe AnnBuilder convert Annotation Cancer probe AnnBuilder convert
17.2 years ago John Zhang ★ 2.9k
0
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1
reply
650
views
NEwbie: How to determine significant enrichment differences of GO term vectors?
GO AnnBuilder GO AnnBuilder
updated 17.2 years ago by ★ 13k • written 17.2 years ago by ▴ 130
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0
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624
views
some questions about
AnnBuilder AnnBuilder
17.2 years ago Nianhua Li ▴ 870
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6
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1.4k
views
AnnBuilder and Diverse Mappings
Annotation GO AnnBuilder Annotation GO AnnBuilder
updated 17.3 years ago by ▴ 870 • written 17.3 years ago by ▴ 130
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2
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990
views
Mouse.lumi problems
AnnBuilder AnnBuilder
updated 17.4 years ago by ★ 1.2k • written 17.4 years ago by ▴ 100
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2
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1.1k
views
ABPkgBuilder error: unable to find an inherited method for function "baseFile<-"
GO Cancer Organism AnnBuilder GO Cancer Organism AnnBuilder
updated 17.4 years ago by 16k • written 17.4 years ago by ★ 2.9k
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0
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852
views
ABPkgBuilder error: unable to find an inherited method for function "baseFile<-"
GO Organism AnnBuilder GO Organism AnnBuilder
17.4 years ago Martin Kircher ▴ 20
0
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0
replies
676
views
Does anyone have a recent annotation for hgu133plus2 ??
Annotation hgu133plus2 AnnBuilder Annotation hgu133plus2 AnnBuilder
17.4 years ago Marco Zucchelli ▴ 10
0
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6
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1.6k
views
GOstats and custom annotation problem
Annotation GO annotate genefilter graph AnnBuilder RBGL GOstats Category Annotation GO
updated 17.4 years ago by 21k • written 17.4 years ago by ▴ 310
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1
reply
805
views
AnnBuilder error: parseData can't access some tmp file
AnnBuilder PROcess biomaRt AnnBuilder PROcess biomaRt
updated 17.4 years ago by ▴ 870 • written 17.4 years ago by ▴ 830
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0
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573
views
OPERON human v3 library
AnnBuilder Resourcerer AnnBuilder Resourcerer
17.5 years ago Morten Mattingsdal ▴ 190
0
votes
8
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2.0k
views
AnnBuilder and Kegg
Pathways GO Survival Cancer Organism annotate affydata vsn AnnBuilder globaltest GO vsn
updated 17.5 years ago by ▴ 190 • written 17.5 years ago by ★ 2.9k
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0
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868
views
Downloading data only once when building many annotation packages with AnnBuilder
Microarray Annotation annotate limma AnnBuilder PROcess Microarray Annotation annotate
17.6 years ago David Weiss ▴ 10
0
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2
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751
views
resolveMaps removed from AnnBuilder?
AnnBuilder AnnBuilder
updated 17.6 years ago by ▴ 870 • written 17.6 years ago by ▴ 290
50 results • Page 1 of 1
Recent ...
Replies
Answer: Counter-directional LFC shrinkage by swbarnes2 ★ 1.4k
The y axes in those plots are logged. The average for condition1 is going to be higher than condition2 because of the very high outliers. …
Comment: Cannot install oligo on Fedora by Guido Hooiveld ★ 4.0k
Thanks for all suggestions and getting to the bottom of this! Unfortunately, fixing C code goes way above my skill level, so I cannot contr…
Comment: Cannot install oligo on Fedora by James W. MacDonald 66k
I think the solution is for the C code in `oligo` to be updated to work with more modern versions of `zlib`. The `zlibbioc` package is real…
Comment: Error in gseDO function by Guido Hooiveld ★ 4.0k
I don't fully understand what you are asking... Yet, in my opinion it doesn't make sense to use the results of only 12 genes for ORA (nor G…
Comment: Counter-directional LFC shrinkage by ATpoint ★ 4.2k
Is this RNA-seq? The unshrunken MA-plot looks very odd and indicates that normalization is completely offset.
Votes
A: DESeq2: add annotations (from data frame) to DESeqDataSet
Answer: Error in gseDO function
Comment: what the test method for enrichGO in clusterProfiler?
A: Comparison between two different group's pathway analysis results
DiffBind Batch Effect
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