Showing : Deprecation • reset
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News: List of Deprecated Packages for Bioc3.18
Deprecation devel Bioconductor Devel
10 months ago • updated 4 weeks ago shepherl 3.9k
2
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2
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News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
3.4 years ago • updated 3.0 years ago shepherl 3.9k
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.1 years ago by 3.9k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
4.8 years ago • updated 4.7 years ago shepherl 3.9k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.7 years ago • updated 4.6 years ago shepherl 3.9k
0
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2
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1.6k
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News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
4.6 years ago • updated 4.5 years ago shepherl 3.9k
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.5 years ago shepherl 3.9k
0
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868
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.4 years ago shepherl 3.9k
0
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797
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.2 years ago shepherl 3.9k
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2
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904
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News: List of Deprecated Packages for Bioc3.17
Bioconductor Deprecation Devel devel
13 months ago • updated 11 months ago shepherl 3.9k
0
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3
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1.0k
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Which library now contains the ssdCoverage command that used to be found in the htseqtools package for R version 4.0.1 ?
Deprecation chipseq htseqtools Bioconductor
updated 3.2 years ago by ▴ 780 • written 3.2 years ago by • 0
0
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5
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News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
2.6 years ago • updated 2.1 years ago shepherl 3.9k
0
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4
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1.2k
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News: List of Deprecated Packages for Bioc3.15
Devel Deprecation Release Bioconductor
2.1 years ago • updated 19 months ago shepherl 3.9k
0
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721
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Running deprecated packages
ToPASeq Deprecation
2.1 years ago pgauthi1 • 0
0
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773
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News: List of Deprecated Packages for Bioc3.16
Release Deprecation Devel Bioconductor
19 months ago • updated 18 months ago shepherl 3.9k
0
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1
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876
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News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
5.0 years ago shepherl 3.9k
0
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3
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1.1k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.9 years ago shepherl 3.9k
17 results • Page 1 of 1
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Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0
> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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