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News: RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
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12 months ago Maria Doyle ▴ 70
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News: Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
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13 months ago Maria Doyle ▴ 70
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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13 months ago Maria Doyle ▴ 70
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News: Translation Hackathon (community event) announcement
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News: BioCAsia Virtual Meeting, 15-18 October 2020
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News: Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
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4.2 years ago shepherl 3.9k
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News: Bioc2020 - Deadline for workshops/talk/poster TOMORROW
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4.2 years ago shepherl 3.9k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals in ONE week
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4.2 years ago shepherl 3.9k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals in two weeks!
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4.3 years ago shepherl 3.9k
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News: Bioc2020 - Registration - Call for abstracts for workshops/talks/poster - travel and caregiver scholarships
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4.3 years ago shepherl 3.9k
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News: Bioc2020 - Registration Open - Call for abstracts workshops/talks/posters Open
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4.3 years ago shepherl 3.9k
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2018 Toronto Bioconductor Conference registration details?
conference event
updated 6.5 years ago by 25k • written 6.5 years ago by • 0
12 results • Page 1 of 1
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Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai by Wei Shi ★ 3.6k
Your bam file names should be stored in a vector and then provided to the `files` parameter.
Comment: Volcano plot of scRNA-seq data not "centered" by Michael Love 42k
Agree with @atpoint Depending on the "groups" in single cell, the question of DE can be not well defined without inserting additional inf…
Answer: Volcano plot of scRNA-seq data not "centered" by ATpoint ★ 4.2k
Sounds like a normalization problem, but I am not sure how to help with that. Indeed you can use control genes, for example use the top 20%…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai by ATpoint ★ 4.2k
I was talking about the command line version.
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai by atan • 0
I tried reading in the .csv version of the SAF with header = F and I'm still getting an error. I'm running: ``` counts <- featureCounts( …
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Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Answer: Documenting resources in an `ExperimentHub` package?
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Seurat/DESeq2 - single cell RNA-seq differential expression
Seurat to SingleCellExperiment Converting error in MAC
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