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bootstrap
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reset
1
vote
3
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1.4k
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Two Genotypes Four Treatments RNA-seq Analysis
salmon
rna-seq
swish
bootstrap
fishpond
updated 2.3 years ago by
Michael Love
42k • written 2.3 years ago by
samuelcjx
• 0
0
votes
6
replies
1.1k
views
tximport lose transcript names with Salmon bootstrap
salmon
tximport
bootstrap
updated 4.2 years ago by
julia.jefferson23
• 0 • written 4.2 years ago by
Cindy
• 0
0
votes
0
replies
934
views
Using log2FC distance matrix in Boot.Phylo to create bootstrapped trees
tree
bootstrap
dgelist
plotmds
6.2 years ago
Larry K.
• 0
0
votes
0
replies
876
views
Jackknifing/bootstrapping input and output question
jackknifing
R
microarray
bootstrap
6.9 years ago
bhgyu
▴ 30
1
vote
7
replies
1.5k
views
[GSVM] bootstrapping error
GSVM
bootstrap
snow
updated 7.4 years ago by
Robert Castelo
★ 3.3k • written 7.4 years ago by
mforde84
▴ 20
0
votes
1
reply
3.7k
views
ape - delete bootstrap values (node.labels) less than a certain value
ape
bootstrap
node
phylogenetic
tree
8.9 years ago
wd
▴ 30
0
votes
1
reply
1.7k
views
DESeq2 -- Bootstrap subsampling to estimate distribution of expression
deseq2
bootstrap
differential expression
updated 9.2 years ago by
Michael Love
42k • written 9.2 years ago by
David Eccles (gringer)
▴ 30
7 results • Page
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Recent ...
Replies
Answer: Documenting resources in an `ExperimentHub` package?
by
James W. MacDonald
66k
The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…
Comment: ChAMP installation issue
by
shepherl
3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Comment: How to arrange multiple plots into one page in NOISeq?
by
baptiste.bidon
• 0
After facing the same problem, I realise that you can direct your plot in the matrix with the *par()* option `par(..., mfg = c(1,2))`. If i…
Comment: ChAMP installation issue
by
Tahirah
• 0
Hello. Could you please share how you managed to install ChAMP in R 4.4.0? I also have R 4.4.0 and Bioconductor 3.19 version and ChAMP fail…
Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
by
James W. MacDonald
66k
Yes, you can use `limma`.
Votes
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
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