Bioconductor Coldata

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285

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DESeq2 design coldata

updated 13 days ago by swbarnes2 ★ 1.4k • written 14 days ago by arfranco ▴ 130

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566

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ColData pheatmap DESeq2

written 11 months ago by dania.khalid • 0

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1.1k

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SingleCellExperiment colData rename

updated 15 months ago by Basti ▴ 780 • written 15 months ago by achoppe ▴ 10

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584

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BiSeq Coldata

4.0 years ago akhaira • 0

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1.4k

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deseq2 levels factor colData

updated 5.2 years ago by Michael Love 42k • written 5.2 years ago by ariel ▴ 20

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42k

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deseq2 coldata

updated 5.5 years ago by swbarnes2 ★ 1.4k • written 5.5 years ago by mjrarcher ▴ 10

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3.1k

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variantannotation coldata

updated 5.6 years ago by Valerie Obenchain ★ 6.8k • written 5.6 years ago by lvclark ▴ 10

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3.6k

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deseq2 coldata NA

updated 5.8 years ago by Michael Love 42k • written 5.8 years ago by t.kuilman ▴ 170

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1.5k

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multiassayexperiment colData

updated 6.4 years ago by Levi Waldron ★ 1.1k • written 6.4 years ago by Lluís Revilla Sancho ▴ 730

9 results • Page 1 of 1

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Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…

Comment: European Bioconductor Conference 2023 planning by angelaesper43 • 0

@Maria Doyle[sexdolltech][1]Hosting EuroBioC provides an excellent opportunity to showcase Bioconductor and computational biology research …

Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 2.0k

Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…

Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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