5 weeks ago • updated 11 days ago
Juan Higareda
•
0
4
votes
9
replies
490
views
0
votes
1
reply
490
views
updated 8 months ago by
keegan
▴
60
•
written 12 months ago by
giancarlo.castellano
•
0
0
votes
1
reply
738
views
0
votes
0
replies
892
views
0
votes
1
reply
704
views
0
votes
1
reply
751
views
1
vote
1
reply
1.3k
views
1
vote
4
replies
1.5k
views
6
votes
5
replies
1.4k
views
updated 5.5 years ago by
shepherl
3.9k
•
written 5.5 years ago by
guy.bioinfo
▴
10
3
votes
16
replies
2.1k
views
updated 5.5 years ago by
keegan
▴
60
•
written 5.6 years ago by
kuckunniwid
•
0
0
votes
3
replies
984
views
0
votes
3
replies
1.2k
views
updated 6.0 years ago by
James W. MacDonald
65k
•
written 6.0 years ago by
Bruno Verstraeten
•
0
2
votes
2
replies
1.5k
views
Recent ...
Replies
Answer: Numerical differences in DESeq2 output depending on different design matrix cons
by
Michael Love
42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs
by
Michael Love
42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub?
by
Daniele
•
0
Hi,
I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation.
Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★
1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
•
0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed.
Sweden, just now
United States, 11 minutes ago
UPF, Barcelona, Spain, 11 minutes ago
United States, 32 minutes ago
Ireland, 1 hour ago
Sweden, just now
United States, 11 minutes ago
UPF, Barcelona, Spain, 11 minutes ago
United States, 32 minutes ago
Ireland, 1 hour ago
Traffic: 336 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6