Bioconductor Gviz

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DMR Methylation R Gviz

updated 6 months ago by Robert Ivanek ▴ 730 • written 3.0 years ago by ltzhou • 0

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626

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rtracklayer Gviz

updated 6 months ago by Hervé Pagès 16k • written 6 months ago by yujin ▴ 10

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Gviz coMET

17 months ago • updated 7 months ago Daniel E. Weeks ▴ 30

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DMRcate Gviz

updated 27 days ago by Tim Peters ▴ 180 • written 14 months ago by jose.ramirez1 ▴ 10

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Gviz

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by ilaria.maurizio • 0

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gviz Saccharomyces_cerevisiae Gviz ideogram

updated 8 months ago by Robert Ivanek ▴ 730 • written 8 months ago by Michael • 0

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372

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Gviz

6 months ago dbsgtk • 0

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rtracklayer UCSC Gviz

6 months ago yujin ▴ 10

8 results • Page 1 of 1

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Answer: Errors in chromosome annotation-biomaRt by James W. MacDonald 65k

If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …

Comment: Help with ENmix readidat by James W. MacDonald 65k

Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …

Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 65k

In that case, probably easiest to subset to the groups being compared.

Comment: Help with ENmix readidat by minardsmitha ▴ 10

Did you figure this out? I have the same issue.

Comment: LRT, more than two conditions and pairwise comparisons by boczniak767 ▴ 720

Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …

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Comment: DESeq2- Mysterious interaction suppresses DEGs

Answer: DESeq2- Mysterious interaction suppresses DEGs

Answer: Subsetting RNAseq data | voomaByGroup()

biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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