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methylmix
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How can I download Methylation data for MethylMix package. (unusual error popped)
MethylMix
3.2 years ago
Shloka Negi
• 0
0
votes
1
reply
882
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how to paralelize this R script in a HPC cluster using Slurm Workload Manager?
methylation
epigenomics
slurm
mpi
methylmix
updated 3.8 years ago by
Kevin Blighe
★ 3.9k • written 3.8 years ago by
parra.sev
▴ 20
0
votes
1
reply
797
views
stuck in "Finding nonparametric adjustments" with MethylMix package.
MethylMix
updated 3.9 years ago by
Kevin Blighe
★ 3.9k • written 3.9 years ago by
sdjnchen
• 0
0
votes
0
replies
691
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Methylmix results are a bit different from beta values results
cancer
methylmix
methylation
betavalues
DMvalues
4.4 years ago
luciomora8
• 0
1
vote
2
replies
954
views
How to handle big data sets (>10GB) in Bioconductor packages?
big data
methylmix
memory problem
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
perdedorium
• 0
0
votes
0
replies
795
views
MethylMix takes so much time for preprocess step
MethylMix
5.9 years ago
serbulentu
• 0
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Comment: How to run allelic imbalance in apeglm
by
parayod376
• 0
Which I care about. [Papa's games][1] thank you for sharing the information. [1]: https://papasgamesfree.github.io
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
FYI, I emailed Benilton and he says he's working on a fix, so stay tuned!
Answer: Error in render R qmd document (could not find function "process")
by
James W. MacDonald
66k
If you have functions in another R document, you have to `source` that document to load the functions into your workspace. Just like you wo…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
• 0
Thank you! I ended up running it with a gtf on command line, partially because I couldn't figure out how to list multiple files in R for in…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
• 0
For some reason, that's still not working for me on command line. I ended up figuring out another way around, though, by converting the g…
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Reduce the number of nodes appear in the cnetplot of clusterprofiler
A: DESeq2: add annotations (from data frame) to DESeqDataSet
Answer: Error in gseDO function
Comment: what the test method for enrichGO in clusterProfiler?
A: Comparison between two different group's pathway analysis results
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