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r update
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Biocgenerics updating problem on ubuntu 17.10
bioconductor
biocgenerics
ubuntu
package updates
r update
6.5 years ago
siinemselvi
• 0
3
votes
3
replies
3.3k
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problem reinstalling Bioconductor package 'clusterProfiler' after updating R to 3.4.0
clusterprofiler
package installation
r update
updated 7.0 years ago by
tjiagoM
▴ 10 • written 7.1 years ago by
klv2706w
▴ 10
2
votes
1
reply
4.6k
views
Upgrade to Bioconductor 3.4 - problems with R
r update
upgrade
bioclite
updated 7.5 years ago by
James W. MacDonald
65k • written 7.5 years ago by
Lna
• 0
0
votes
2
replies
1.7k
views
package ‘virtualArray’ is not available (for R version 3.2.1)
r update
updated 8.9 years ago by
Martin Morgan
25k • written 8.9 years ago by
filip.roudnicky
• 0
3
votes
11
replies
6.3k
views
Problems getting Bioc 3.1 after upgrade to R_3.2.0
biocinstaller
r update
9.1 years ago
meeta.mistry
▴ 30
3
votes
11
replies
14k
views
Problems updating Bioconductor with R 3.2.0
upgrade
r update
updated 9.1 years ago by
Dan Tenenbaum
★ 8.2k • written 9.1 years ago by
daniil.sarkisyan
▴ 10
2
votes
2
replies
2.0k
views
R 3.1.1 - Update error
R update
updated 9.5 years ago by
James W. MacDonald
65k • written 9.5 years ago by
AJC
▴ 10
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Answer: ERROR; return code from pthread_create() is 22
by
James W. MacDonald
65k
Seems OK to me. ``` > dat <- ReadAffy() > dat AffyBatch object size of arrays=744x744 features (20 kb) cdf=HG-U219 (49386 affyids) …
Answer: LRT, more than two conditions and pairwise comparisons
by
James W. MacDonald
65k
Unless you think the different lines or tissues will have very different within-group variances, you should just analyze together and make …
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
by
James W. MacDonald
65k
It appears that batch is orthogonal to the treatment, so you can just fit a batch effect in your model.
Answer: Control group between 2 batches have different expression in RNAseq data
by
James W. MacDonald
65k
Since batch is orthogonal to the treatment, you just add a batch factor to your model.
Answer: Subsetting RNAseq data | voomaByGroup()
by
Anna
• 0
Hi Gordon. Thank you so much. Your reply is extremely helpful, and I feel more confident moving forward with the analysis. Also, very inte…
Votes
Answer: Subsetting RNAseq data | voomaByGroup()
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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