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reads
•
reset
2
votes
3
replies
1.5k
views
Boxplot function not showing all reads length on x-axis
boxplot
reads
fastq
sequencing
rsubread
updated 5.0 years ago by
Wei Shi
★ 3.6k • written 5.0 years ago by
Raito92
▴ 60
2
votes
5
replies
945
views
Software package for RNA-seq reads simulation?
rna-seq
reads
updated 5.0 years ago by
Gordon Smyth
50k • written 5.0 years ago by
Ramiro Magno
▴ 100
0
votes
1
reply
1.3k
views
DEXseq reads all in ambiguous_readpair_position and empty categories
dexseq
reads
6.9 years ago
514028929
• 0
0
votes
2
replies
960
views
DiffBind absence of reads
diffbind
reads
bamfiles
updated 7.1 years ago by
Rory Stark
★ 5.2k • written 7.1 years ago by
kbrnrc
• 0
0
votes
7
replies
1.8k
views
Speeding up or replacing Loops to process Bam Reads
genomicranges
reads
genomicfeatures
Bam
9.2 years ago
gen
▴ 30
2
votes
2
replies
3.1k
views
DESeq: filter out low count reads
deseq
filter
reads
9.3 years ago
ccheung
• 0
0
votes
1
reply
2.2k
views
Rename read-chromosome-names to refseq-chromosome-names.
reads
updated 9.6 years ago by
James W. MacDonald
65k • written 9.6 years ago by
marcovth
• 0
7 results • Page
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Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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