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sce
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reset
2
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5
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4.2k
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Merging multiple single cell experiment objects from different samples
sce
SingleCellExperiment
merge
updated 15 months ago by
mollyab12
• 0 • written 2.1 years ago by
achoppe
▴ 10
1
vote
2
replies
1.9k
views
ident function in sce
SingleCellExperiment
cluster
identities
sce
updated 4.1 years ago by
Aaron Lun
★ 28k • written 4.1 years ago by
reinepapillon
• 0
0
votes
1
reply
1.3k
views
Clearer error messages in SingleCellExperiment cbind
singlecellexperiment
sce
scater
updated 4.1 years ago by
Aaron Lun
★ 28k • written 4.1 years ago by
bharris
• 0
2
votes
4
replies
2.4k
views
Quality control in SingleCellExperiment
SingleCellExperiment
scater
sce
quality control
updated 3.3 years ago by
1498554536
• 0 • written 4.2 years ago by
Linda
• 0
3
votes
3
replies
1.5k
views
Different number of marker genes between same clusters
sce
markers
single cell
DE
clusters
4.7 years ago
ludmi.b
• 0
4
votes
7
replies
4.6k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 5.4 years ago by
Aaron Lun
★ 28k • written 5.4 years ago by
TJ
• 0
1
vote
2
replies
895
views
Inserting "Biotype" into scater SCE objects
scater
sce
biotype
R
updated 6.2 years ago by
Aaron Lun
★ 28k • written 6.2 years ago by
thebadpenny
• 0
0
votes
2
replies
1.0k
views
How to process ids containing "." in BiomaRt?
sce
biomart
annotation
updated 6.9 years ago by
Mike Smith
★ 6.5k • written 6.9 years ago by
linda.c.dansereau
• 0
8 results • Page
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Comment: GSVA function
by
Robert Castelo
★ 3.3k
No, negative values may occur after log transformation when the `log(x)` is taken from a positive number `x with 0 < x < 1`, and therefore …
Comment: conumee with Infinium MethylationEPIC v2.0
by
sgomez
• 0
Hi Max, Could you try this? https://support.bioconductor.org/p/9136138/#9136840
Comment: Error in render R qmd document (could not find function "process")
by
ATpoint
★ 4.2k
This is not related to Bioconductor, and even if it was, please understand that without code one cannot debug these questions. The most obv…
Comment: GSVA function
by
michelafrancesconi8
• 0
When I log trasform my matrix after the DESeq2 normalization, I have some negative value, should I add a 1 to all my matrix? Thank you Mi…
Comment: Normalisation using clinical traits in RNA seq using DESeq2
by
sukeshinik5
• 0
Thank you, so much for the response. When we estimate factors of unwanted variable, which is the better options for factorisation of the va…
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DiffBind Batch Effect
A: DiffBind Batch Effect
A: DiffBind Batch Effect
C: DiffBind Batch Effect
C: DiffBind Batch Effect
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